Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0100 ATGGAGAAGAAAGAGATGGCTGTGAAAACTGAGGATGCGGTTGGGTCCTCTTCTTTCCCTTGTTATAATTATTCAAACCTTTATCCATTCTCGAACGCGTTTGATTTCTCTGAGGTTGAAAAGAGCTCTTTAGGGTTTATGGAGTTACTGGGTGTGCAGGACTATAGTCCTCTGCTTGAGTTGCCTCAACTTTCAACTGTGTCCGTGCAATCTCATCATCACTCTACAGTTACGGTTCCTTCTGATAACGGGAAAGAGTGTTCTGAGGTGTTGAACCACCAGCCTGCCACTCCAAACTCTTCTTCCATTTCATCCGCGTCCACTGATGCAGTCAATGATGAACAGAAGAAGACTCTAGACCAAGCAGAAGAAGATGATGATGATGATGATGAAGGACAACACAAGACTAAGAAACAGTTGAAGCCCAAGAAGACAAATCAGAAGAGACAGAGAGAACCAAGATTCGCGTTCATGACGAAAAGCGAGGTCGATCATCTGGAAGATGGGTACAGATGGAGAAAGTACGGTCAAAAGGCCGTGAAAAATAGCCCCTTTCCCAGGAGCTACTATCGTTGCACCAGTGTTTCATGTAATGTGAAGAAACGTGTGGAGAGATCTTTCACTGATCCAAGCGTTGTAGTGACAACCTATGAAGGCCAACACACACATCCCAGCCCAGTTATGCCTCGCTCAGTTGTCTCTTCTGGATACGCCAACAACTTTGCTTCAGTTTTGCCACTAGGAAACTACTTATCCCAGTATCAGCAGCAGCACCATCACCACCAACAACAAAAGCTACTTGTCAACACATTGTCCTCTTTGGGTTTTCCTTACAATGATTCTTCATCTCCAAAGAACGCTGTTTTTATTCAAGAGAGACGGCTTTGTAGTAATCAAGGGACGAATGCGTTTCTGAGGGACCATGGACTTCTTCAAGATGTTGTTCCTTCACACATGTTGAAAGAAGAGTAG 972 0.4434 MEKKEMAVKTEDAVGSSSFPCYNYSNLYPFSNAFDFSEVEKSSLGFMELLGVQDYSPLLELPQLSTVSVQSHHHSTVTVPSDNGKECSEVLNHQPATPNSSSISSASTDAVNDEQKKTLDQAEEDDDDDDEGQHKTKKQLKPKKTNQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSVSCNVKKRVERSFTDPSVVVTTYEGQHTHPSPVMPRSVVSSGYANNFASVLPLGNYLSQYQQQHHHHQQQKLLVNTLSSLGFPYNDSSSPKNAVFIQERRLCSNQGTNAFLRDHGLLQDVVPSHMLKEE* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0100 323 PANTHER WRKY TRANSCRIPTION FACTOR 1 315 - -
Gso10g0100 323 SUPERFAMILY WRKY DNA-binding domain 158 226 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso10g0100 323 ProSiteProfiles WRKY domain profile. 161 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso10g0100 323 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 315 IPR044810 GO:0003700
Gso10g0100 323 MobiDBLite consensus disorder prediction 72 112 - -
Gso10g0100 323 SMART WRKY_cls 166 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso10g0100 323 Pfam WRKY DNA -binding domain 167 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso10g0100 323 PIRSF WRKY_txn_fact_IIc 1 323 IPR017396 GO:0003700
Gso10g0100 323 Gene3D WRKY domain 151 227 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso10g0100 323 MobiDBLite consensus disorder prediction 72 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0100 Gso-Chr10 1078969 1081104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0100 35 323 WRKY Transcription Factor Family AT2G47260 48.276 4.29e-71 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso10g0100 WRKY 3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0100 - - gmx:732591 599.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0096 2 1022578 1024754 Gso10g0100 10 1078969 1081104 GST
Gso19g1833 19 47059017 47060822 Gso10g0100 10 1078969 1081104 PCT
Gso3g1870 3 44271426 44273346 Gso10g0100 10 1078969 1081104 PCT
Gso10g0100 10 1078969 1081104 Gso19g1833 19 47059017 47060822 PCT
Gso10g0100 10 1078969 1081104 Gso3g1870 3 44271426 44273346 PCT