Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0087 ATGGTGGCTGAAGCAGAGGTTGTGTGTCAACAAAACGTGGGTGTGTTGGATGTGAAGCATTTTCCAAATAAGGATGTTAAGTCTGCAGACAGGATCTCAGATGCTGCTCTAGAATCTGCGGTTCTGCAATTTATCCCATGCATCCGTTCTGGTAGTTTTGCTGACATTGGGCCACGGAGATACATGGAAGATGAACATATAAGGATAGATGATTTGTCGTCTCATCTGGGATCTCTATACAACTTTCCAAAACCAAGTGCCTTCTATGGGGTGTTTGATGGTCATGGAGGACCTGAAGCTGCGGCTTATATAAGAAAACACGTGATAAAATTCTTCTTCGAAGATGTCAGTTTCCCACAGACATCCGAAGTCGATAATGTATTTTTGGAAGAGGTAGAGGATTCCCTCAGAAAGGCATTTCTTTTGGCTGATTCAGCTTTGGCCGATGATTGCAGCGTGAATAGTTCATCAGGCACTACGGCCCTTACTGCTTTGATATTTGGAAGGCTTCTAATGGTGGCCAATGCTGGCGACTGCCGAGCAGTTCTCTGTCGCAAAGGAGAGGCCATTGACATGTCTGAAGATCACAGGCCTATTTATCTATCAGAGCGGAGGCGAGTTGAAGAATTGGGTGGCTACATAGAAGATGGTTATCTGAATGGGGTTTTATCAGTTACTCGAGCACTAGGGGACTGGGACATGAAGTTACCTAAGGGTGCTCCCTCACCTTTGATTGCAGAGCCTGAGTTTCGGCAAGTGGTTCTAACAGATGATGATGAATTCCTCATCATTGGATGCGACGGCATCTGGGATGTGATGTCAAGTCAGCATGCTGTTAGCCTTGTTCGGAAAGGCCTGAGGCGGCACGATGACCCAGAGAAATGCGCCAGGGACCTGGTTATGGAGGCATTACGTCTCAACACATTCGACAATCTCACTGTGATCATTGTATGTTTCTCTTCCCTTGACCACGCGGAGCCAGAGCCATCCCCTCCTCGCCAACGGAAATTGAGATGCTGTAGCCTCTCTGCAGAGGCTCTTTGTAGCTTGAGGAGCTTGTTGGAAGGCAGTGCAAGCAACTGA 1083 0.4737 MVAEAEVVCQQNVGVLDVKHFPNKDVKSADRISDAALESAVLQFIPCIRSGSFADIGPRRYMEDEHIRIDDLSSHLGSLYNFPKPSAFYGVFDGHGGPEAAAYIRKHVIKFFFEDVSFPQTSEVDNVFLEEVEDSLRKAFLLADSALADDCSVNSSSGTTALTALIFGRLLMVANAGDCRAVLCRKGEAIDMSEDHRPIYLSERRRVEELGGYIEDGYLNGVLSVTRALGDWDMKLPKGAPSPLIAEPEFRQVVLTDDDEFLIIGCDGIWDVMSSQHAVSLVRKGLRRHDDPEKCARDLVMEALRLNTFDNLTVIIVCFSSLDHAEPEPSPPRQRKLRCCSLSAEALCSLRSLLEGSASN* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0087 360 PANTHER PROTEIN PHOSPHATASE 2C 49-RELATED 1 342 - -
Gso10g0087 360 SUPERFAMILY PP2C-like 43 321 IPR036457 -
Gso10g0087 360 ProSitePatterns PPM-type phosphatase domain signature. 88 96 IPR000222 GO:0043169
Gso10g0087 360 Pfam Protein phosphatase 2C 59 311 IPR001932 -
Gso10g0087 360 SMART PP2C_4 38 317 IPR001932 -
Gso10g0087 360 Gene3D - 38 325 IPR036457 -
Gso10g0087 360 PANTHER PROTEIN PHOSPHATASE 2C 1 342 IPR015655 GO:0004722|GO:0006470
Gso10g0087 360 CDD PP2Cc 48 319 IPR001932 -
Gso10g0087 360 ProSiteProfiles PPM-type phosphatase domain profile. 49 319 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0087 Gso-Chr10 928253 930973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0087 62 356 PP2C-type Phosphatase Gene Family AT3G62260 71.622 2.74e-157 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0087 K14803 - gmx:100819791 698.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0080 2 888428 891138 Gso10g0087 10 928253 930973 GST