Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0076 ATGGTATCAGAGCAGGTTCTGACCTTGGGACCTTGTTTTCGCTTCCATTGCGACGAGTACCCACCATTTGTGGTTCACGCACCAAGCCCAATAAGTGCTGGGCGTGAAGGGGAAAGTTCGACTCAGTTCAGAGTAGGGAAAGCCTCTGATCTTCTTGTTCTTGAAAGAAAACACTCTCAACACTCAACAGAAATTCTGGCTAATCCTTGGTGGACCGGTCATCAGGTGGGGTTGGGTGTAGGGGTAGACCCTGCAGCAACCAATTCACCTTCTTCCAACCTAAACAAACGCCACATGGACCTTTCCATCAACGAAAGAAGCCTTGTTAGAGAAAGACAAGAGGAAGAAGAAGAAGAAGAAGATGAAAGAGACAACGGTGATGAACCCAAAGAGGGTGCAGTTGAGGCTGGAACACGCAGGCCAAGAGGGAGACCCCCTGGTTCCAAAAACAAGCCCAAACCCCCCATCTTCGTCACCAGGGACAGCCCAAACTCCCTCAGAAGCCATGTCATGGAGGTTGCCGGCGGGGCCGACGTGGCGGAAAGTGTGGCCCAGTTTGCACGGAGGCGCCAGCGTGGGGTGTGTGTCCTCAGTGGGAGCGGTTCCGTGGCCAACGTTACTCTCCGGCAACCTTCGGCACCGGGAGCGGTTGTGGCACTTCATGGAAGGTTTGAAATTCTGTCCCTAACCGGAGCGTTTCTGCCTGGTCCTGCCCCGCCAGGAGCTACAGGACTTACTGTGTATCTCGCTGGAGGGCAGGGCCAGGTAGTGGGAGGGAGCGTCGTGGGCTCCCTTGTGGCAGCTGGACCAGTCATGGTGATTGCTGCCACTTTTGCTAATGCTACCTATGAGAGGTTGCCCCTTGAGGAGGAGGAAGACGACGGTGGTGGTAGCGTGCAAGGAGGGAGTACCCTAGGAGGATCTCCTCATGGAATTGGTAGTAGCGGCGGCGGTGGCGGTAGTGGTGGTGGCCACTTATCAGGTGGGATTCCTGGTCCTTCTTCTTTGCCTTTGTATAATCTCCCACCAAATCTTCTTCCCAATGGAGGCCAAGTGGGGCATGAGGCTTTTGCTTGGGCTCATGGCCATGGAAGGCCACCTTACTGA 1107 0.5492 MVSEQVLTLGPCFRFHCDEYPPFVVHAPSPISAGREGESSTQFRVGKASDLLVLERKHSQHSTEILANPWWTGHQVGLGVGVDPAATNSPSSNLNKRHMDLSINERSLVRERQEEEEEEEDERDNGDEPKEGAVEAGTRRPRGRPPGSKNKPKPPIFVTRDSPNSLRSHVMEVAGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPSAPGAVVALHGRFEILSLTGAFLPGPAPPGATGLTVYLAGGQGQVVGGSVVGSLVAAGPVMVIAATFANATYERLPLEEEEDDGGGSVQGGSTLGGSPHGIGSSGGGGGSGGGHLSGGIPGPSSLPLYNLPPNLLPNGGQVGHEAFAWAHGHGRPPY* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0076 368 MobiDBLite consensus disorder prediction 99 113 - -
Gso10g0076 368 ProSiteProfiles PPC domain profile profile. 163 302 IPR005175 -
Gso10g0076 368 CDD DUF296 167 250 IPR005175 -
Gso10g0076 368 SUPERFAMILY AF0104/ALDC/Ptd012-like 163 291 - -
Gso10g0076 368 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 20 100 368 - -
Gso10g0076 368 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 100 368 IPR014476 GO:0003680
Gso10g0076 368 MobiDBLite consensus disorder prediction 82 164 - -
Gso10g0076 368 Coils Coil 105 125 - -
Gso10g0076 368 Pfam Plants and Prokaryotes Conserved (PCC) domain 167 279 IPR005175 -
Gso10g0076 368 MobiDBLite consensus disorder prediction 289 329 - -
Gso10g0076 368 Gene3D - 166 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0076 Gso-Chr10 818844 824662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0076 66 368 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 59.283 7.98e-98 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0076 - - gmx:102663643 357.451