Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso10g0063 | ATGGAGAAGACCCAAAAGGAAAAGCATGACAAGTTGAAGGAGAAGGGAAGGAAAGAAGTCCGGTACCGCGGCGTCCGAAGGCGGCCGTGGGGCAAGTATGCGGCGGAGATAAGAGACCCTTCTAAGCAAGGGTCACGGTTGTGGTTGGGGACTTTTGAGACAGGTGAAGAGGCAGCTAGAGCATATGATCATGCAGCCTTTACCATGAGGGGTCATGTTGCAATTTTGAATTTTCCTAATGAGTACCATTCTCATCATGTCAGGGGCTATTCTCCAAATTTAGCATCATCATCATCTTCCATTACTCATGCCGGTGGTGGACAACAAAGGCAAGTTTTTGAGTTTGAGTATTTGGATGATAAGGTGTTGGAGGAGCTTCTTGAGTTTGAAGAAAACAAGGTTCAGAAAGGTTGA | 414 | 0.4638 | MEKTQKEKHDKLKEKGRKEVRYRGVRRRPWGKYAAEIRDPSKQGSRLWLGTFETGEEAARAYDHAAFTMRGHVAILNFPNEYHSHHVRGYSPNLASSSSSITHAGGGQQRQVFEFEYLDDKVLEELLEFEENKVQKG* | 138 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso10g0063 | 137 | SUPERFAMILY | DNA-binding domain | 21 | 80 | IPR016177 | GO:0003677 | |
Gso10g0063 | 137 | MobiDBLite | consensus disorder prediction | 1 | 19 | - | - | |
Gso10g0063 | 137 | ProSiteProfiles | AP2/ERF domain profile. | 21 | 79 | IPR001471 | GO:0003700|GO:0006355 | |
Gso10g0063 | 137 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Gso10g0063 | 137 | PRINTS | Ethylene responsive element binding protein signature | 22 | 33 | IPR001471 | GO:0003700|GO:0006355 | |
Gso10g0063 | 137 | PRINTS | Ethylene responsive element binding protein signature | 45 | 61 | IPR001471 | GO:0003700|GO:0006355 | |
Gso10g0063 | 137 | Gene3D | AP2/ERF domain | 20 | 80 | IPR036955 | GO:0003700|GO:0006355 | |
Gso10g0063 | 137 | SMART | rav1_2 | 21 | 85 | IPR001471 | GO:0003700|GO:0006355 | |
Gso10g0063 | 137 | Pfam | AP2 domain | 21 | 72 | IPR001471 | GO:0003700|GO:0006355 | |
Gso10g0063 | 137 | PANTHER | ETHYLENE RESPONSE FACTOR | 7 | 131 | - | - | |
Gso10g0063 | 137 | PANTHER | DNA-BINDING DOMAIN | 7 | 131 | IPR044808 | GO:0003700|GO:0009873 | |
Gso10g0063 | 137 | CDD | AP2 | 21 | 80 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso10g0063 | Gso-Chr10 | 717547 | 718416 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso10g0063 | 18 | 133 | AP2-EREBP Transcription Factor Family | AT3G23230 | 66.129 | 5.18e-49 | 152 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Gso10g0063 | AP2 | 8.4e-16 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso10g0063 | - | - | gmx:100814296 | 265.774 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso2g0055 | 2 | 682333 | 683191 | Gso10g0063 | 10 | 717547 | 718416 | GST |