Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0063 ATGGAGAAGACCCAAAAGGAAAAGCATGACAAGTTGAAGGAGAAGGGAAGGAAAGAAGTCCGGTACCGCGGCGTCCGAAGGCGGCCGTGGGGCAAGTATGCGGCGGAGATAAGAGACCCTTCTAAGCAAGGGTCACGGTTGTGGTTGGGGACTTTTGAGACAGGTGAAGAGGCAGCTAGAGCATATGATCATGCAGCCTTTACCATGAGGGGTCATGTTGCAATTTTGAATTTTCCTAATGAGTACCATTCTCATCATGTCAGGGGCTATTCTCCAAATTTAGCATCATCATCATCTTCCATTACTCATGCCGGTGGTGGACAACAAAGGCAAGTTTTTGAGTTTGAGTATTTGGATGATAAGGTGTTGGAGGAGCTTCTTGAGTTTGAAGAAAACAAGGTTCAGAAAGGTTGA 414 0.4638 MEKTQKEKHDKLKEKGRKEVRYRGVRRRPWGKYAAEIRDPSKQGSRLWLGTFETGEEAARAYDHAAFTMRGHVAILNFPNEYHSHHVRGYSPNLASSSSSITHAGGGQQRQVFEFEYLDDKVLEELLEFEENKVQKG* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0063 137 SUPERFAMILY DNA-binding domain 21 80 IPR016177 GO:0003677
Gso10g0063 137 MobiDBLite consensus disorder prediction 1 19 - -
Gso10g0063 137 ProSiteProfiles AP2/ERF domain profile. 21 79 IPR001471 GO:0003700|GO:0006355
Gso10g0063 137 MobiDBLite consensus disorder prediction 1 20 - -
Gso10g0063 137 PRINTS Ethylene responsive element binding protein signature 22 33 IPR001471 GO:0003700|GO:0006355
Gso10g0063 137 PRINTS Ethylene responsive element binding protein signature 45 61 IPR001471 GO:0003700|GO:0006355
Gso10g0063 137 Gene3D AP2/ERF domain 20 80 IPR036955 GO:0003700|GO:0006355
Gso10g0063 137 SMART rav1_2 21 85 IPR001471 GO:0003700|GO:0006355
Gso10g0063 137 Pfam AP2 domain 21 72 IPR001471 GO:0003700|GO:0006355
Gso10g0063 137 PANTHER ETHYLENE RESPONSE FACTOR 7 131 - -
Gso10g0063 137 PANTHER DNA-BINDING DOMAIN 7 131 IPR044808 GO:0003700|GO:0009873
Gso10g0063 137 CDD AP2 21 80 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0063 Gso-Chr10 717547 718416 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0063 18 133 AP2-EREBP Transcription Factor Family AT3G23230 66.129 5.18e-49 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gso10g0063 AP2 8.4e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0063 - - gmx:100814296 265.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0055 2 682333 683191 Gso10g0063 10 717547 718416 GST