Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0060 ATGGCTGGAGAACTTGGAGTGCTGAATGCACTTGATGTGGCAAAGACACAATGGTACCACTTCACTGCAATTGTGATAGCTGGAATGGGTTTCTTTACTGATGCCTATGATCTCTTCTGCATTTCCCTAGTCACCAAGCTACTAGGGAGGCTATATTACACAGAACCAGGTGCAGCAAAGCCGGGAACTCTTCCTCCAAGAGTTCAAGCTTCTGTGACTGGTGTTGCACTGTGTGGCACATTAGCTGGCCAACTATTCTTTGGTTGGCTTGGTGACAAAATGGGGAGAAAAAGAGTCTATGGACTAACTCTTATCCTCATGGTAGTCTGCTCCCTTGCCTCAGGACTCTCCTTTGGGTCAACTCCAGAGGGTGTCATGGCCACACTTTGCTTCTTCAGGTTCTGGCTAGGCTTCGGGATTGGTGGTGACTACCCTCTTTCTGCCACAATTATGTCTGAATATGCAAACAAGAAGACACGTGGCGCATTCATAGCCGCGGTGTTTGCAATGCAAGGATTTGGAATCCTGGCTGGTGGAGTGGTGGCATTGATTGTCTCATATGCATATGATCAAAAGTACAAACTTCCTAGTTATGCACAGAATCCAGAAGCATCCTTGGATCCTGCATTTGACTATGTTTGGAGAATAGTTTTGATGTTTGGTGCAATTCCAGCTGCACTCACCTACTACTGGCGCATGAAGATGCCAGAGACAGCACGTTACACAGCCCTTGTGGCCAAGAATGCAAAACAAGCTGCTGCAGACATGTCTAAGGTGTTGCAAGTGGAACTTGAAGCTGAAGAGGAAAAGGTGATGAAATTGACAGAGAATGAGAGTAACAAGTATGGTTTGTTCACCAAGGAATTTGCGAAACGCCATGGCCTGCATTTGTTGGGAACCACCACCACTTGGTTCTTGTTGGACATAGCATTCTACAGCCAAAATCTTTTCCAAAAGGACATTTTCAGTGCAATTGGGTGGATCCCTCCAGCAAAGGAAATGAATGCAATCCACGAGGTGTATAAGATTGCAAGAGCACAAACACTTATAGCACTGTGCAGTACTGTGCCAGGTTACTGGTTCACAGTGGCATTAATTGATTACATGGGCCGTTTCGCCATCCAATTGATGGGGTTCTTCTTCATGACTGTGTTCATGTTTGCTTTGGCTATACCATATCATCACTGGAGTGAGAAAGAAAACAGAATTGGGTTTGTGGTGATGTACTCTTTAACCTTTTTCTTTGCCAATTTTGGTCCAAATGCCACCACATTTGTTGTGCCAGCAGAAATTTTCCCTGCAAGGCTAAGGTCCACTTGCCATGGAATCTCTGCTGCTGCAGGAAAAGCTGGTGCAATTGTGGGTGCATTTGGGTTCCTATATGCTGCACAAAGCAAGGACCCTTCCAAGACTGATGCAGGGTACCCTACTGGTATTGGGATTAAGAACTCACTCATTATGCTTGGTGTGATCAACTTCATTGGGATGCTATTCACCTTGCTGGTTCCTGAAGCAAAGGGGAAATCACTGGAGGAGTTGAGTGGGGAGAATAATGAAAATGATGCTGAACATGCAGTGTCTGCTAGGACAGTTCCTGTTTGA 1602 0.4557 MAGELGVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRLYYTEPGAAKPGTLPPRVQASVTGVALCGTLAGQLFFGWLGDKMGRKRVYGLTLILMVVCSLASGLSFGSTPEGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGVVALIVSYAYDQKYKLPSYAQNPEASLDPAFDYVWRIVLMFGAIPAALTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELEAEEEKVMKLTENESNKYGLFTKEFAKRHGLHLLGTTTTWFLLDIAFYSQNLFQKDIFSAIGWIPPAKEMNAIHEVYKIARAQTLIALCSTVPGYWFTVALIDYMGRFAIQLMGFFFMTVFMFALAIPYHHWSEKENRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPSKTDAGYPTGIGIKNSLIMLGVINFIGMLFTLLVPEAKGKSLEELSGENNENDAEHAVSARTVPV* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0060 533 CDD MFS_PhT 24 506 - -
Gso10g0060 533 MobiDBLite consensus disorder prediction 512 533 - -
Gso10g0060 533 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 507 IPR020846 GO:0022857
Gso10g0060 533 Coils Coil 257 277 - -
Gso10g0060 533 TIGRFAM 2A0109: phosphate:H+ symporter 10 516 IPR004738 GO:0005315|GO:0006817|GO:0016021
Gso10g0060 533 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 3 526 - -
Gso10g0060 533 Gene3D MFS general substrate transporter like domains 19 265 IPR036259 -
Gso10g0060 533 Gene3D MFS general substrate transporter like domains 271 530 IPR036259 -
Gso10g0060 533 PANTHER HIGH AFFINITY INORGANIC PHOSPHATE TRANSPORTER 3 526 - -
Gso10g0060 533 Pfam Sugar (and other) transporter 24 513 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gso10g0060 533 SUPERFAMILY MFS general substrate transporter 11 514 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0060 Gso-Chr10 677842 681393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0060 1 521 Inorganic Solute Cotransporters AT3G54700 79.885 0.0 872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0060 K08176 - gmx:100795623 1026.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0052 2 628342 632949 Gso10g0060 10 677842 681393 GST
Gso19g1363 19 42439775 42442753 Gso10g0060 10 677842 681393 PCT
Gso3g1368 3 39623654 39626954 Gso10g0060 10 677842 681393 PCT