Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0026 ATGCCAGTGAGACAGATGAGGGAGGGCTCAGAACAGCACATTGTGATCAAACCCCATTTGCAGAACCCCATGAATGGAGCTAAGAAGGTTCCTAGAGCTGTTCAAAATGGCAAAGGTTCACCACCGCCACCACTGTCACAACAGGAACTACCCCACAACCAAACTTCACCTCATGCAAGGAACAAGGGGAGAAGAAGGAGCCGAGGTGGAGGAAGAAAATGTGATCAAGGAGATGTTTTGATGAGACCTATTGTGACTAGTGGTGTTGAAAATGGAAGCACCATGTGTGGTGAAAAAGAGATGAGTTACCCTACTTCAAGCAAGTCGTTGAGCTTTGCTCCTAGACCTGGCTATGGACAAGTTGGAACAAAGTGCATTGTGAAGGCTAACCACTTCTTTGCAGAGTTACCAGACAAGGACTTGAACCAGTATGATGTCAGTATTACCCCTGAAGTGTCTTCCAAAGCAGTGAACAGGTCCATTATAGCAGAACTTGTGAGGCTGTATAAAGAGTCTGACCTTGGGATGAGGCTTCCAGCATATGATGGCAGAAAAAGTCTGTACACTGCAGGGCCACTTCCCTTTTCATGGAGAGAGTTTAAGATAAAGGTTGTGGATGATGAGGATGGAGTTAATGGCTCCAAAAGGGAAAGAGAATATAGAGTGGTGATCAAGTTTGTTGCCAGGGCAAATTTGCATCACTTGGGCCAGTTTCTGGCTGGTAAATGTGCTGATGCTCCACAAGAGACACTCCAAATTCTTGACATTGTATTAAGAGAGCTATCATCTAAGAGGTTTTGCCCAATTGGGAGGTCCTTCTTTTCACCTGATATTAGAACACCACAACGGCTTGGAGAGGGTTTGGAATCATGGTGTGGATTTTACCAAAGCATAAGGCCTACTCAGATGGGTCTTTCCCTCAATATTGATATGGCTTCTGCTGCGTTCATTGAACCTCTTCCAGTTGTGGAATATGTTGACCAGCTATTAGGAAAAGATATCCTGTCGAGGCAATTGTCCGACGCTGATCGCATTAAAATTAAGAAAGTCCTTAGAGGTGTTAAAGTTGAAGTAACCCACAGAGGGAGTGTTAGAAGAAAGTATCGAGTTTCTGGTTTGACTTCTCAACCAACCAGAGAACTTGTGTTTCCCGTTGATGAGAATTCAACTATGAAGTCCGTAGTTGAATACTTCCAAGAGATGTATGGTTTCACAATTAAATATTCTCACCTTCCTTGCCTTCAAGTAGGAAATCAAAAGAAAGCAAATTATTTACCTATGGAGGCCTGCAAAATTGTTGAGGGACAACGATATACAAAAAGGTTGAATGAGAAGCAAATCACTGCTCTCTTGAAAGTTACTTGTCAAAGACCTCGCGATCGAGAAAATGACATTTTGCAGACCATTCAGCAAAATGCTTATGACCAAGATCCTTATGCAAAGGAATTTGGAATTAAAATAAGTGAAAAGCTAGCTTCTGTAGAAGCACGAATTCTCCCTGCCCCATGGCTTAAATATAACGAAAGTGGGAAAGAAAAGAATTGTTTACCCCAAGTTGGCCAGTGGAATATGATGAACAAGAAAATGATAAATGGGATGACTGTCAGCCAGTGGGCATGCATAAATTTTTCACGAAGCGTACAAGACAGTGTTGCTCGCACTTTTTGTAATGAATTAGTCCAAATGTGCCAAGTATCTGGCATGGAATTTAATCCAGAGCCTGTTATCCCCATCTACAATGCCAAATCAGAACATGTGGAGAAAGCTTTGAAGTATGTTTACCATGTGTCAACAAACAAAACAAAAGGAAAGGAATTGGAGCTTTTGTTAGCAATATTGCCTGACAACAATGGTTCTCTCTATGGTGATCTCAAGCGTATTTGTGAAACGGACCTTGGTTTAATTTCTCAATGTTGTTTGACTAAGCATGTCTTTAAGATCACTAAGCAGTATTTGGCTAATGTGTCTTTGAAAATCAATGTCAAGATGGGAGGTAGAAACACCGTTCTGGTTGATGCTGTAAGCTGTAGAATACCATTGGTTAGTGACATACCAACTATAATATTTGGAGCGGATGTTACCCATCCTGAAAATGGAGAAGACTCCAGCCCTTCAATAGCAGCTGTAGTAGCATCTCAAGACTGGCCTGAACTGACAAAATATGCTGGTTTAGTGTGTGCTCAAGCTCATAGACAGGAACTCATACAAGATTTGTACAAAATGTGGCACGACCCTGTTCGCGGCTTAGTCAGTGGTGGTATGATCCGAGATTTGTTGATTTCCTTTAGAAAGGCAACCGGTCAGAAGCCTCTAAGGATTATATTTTATAGGGATGGTGTAAGTGAAGGGCAATTTTACCAAGTTCTACTTTATGAGTTGGATGCAATTCGGAAGGCATGCGCTTCTTTAGAACCAAACTATCAACCTCCAGTAACTTTCATAGTTGTACAAAAAAGACACCATACTCGGTTGTTTGCAAATAACCACAGGGACAGGAACAGTACAGATAAGAGTGGAAATATATTGCCTGGGACTGTAGTTGATTCCAAAATCTGTCATCCAACAGAATTTGATTTTTATCTCTGTAGTCATGCTGGCATCCAGGGTACGAGTCGTCCAGCTCATTATCATGTTCTGTGGGATGAAAACAACTTCACAGCAGATGGAATTCAGTCTTTGACAAACAATCTCTGTTATACATATGCCAGGTGTACACGCTCTGTATCTGTTGTTCCTCCAGCGTATTACGCACATTTAGCAGCTTTTCGAGCACGTTTCTATATGGAGCCAGACCTGCAGCAGGAGAATGGCTCCTCAGGTGGTGGCTCCAGGGCAACAAGAGCAGGTGGAGTCAAGCCATTGCCAGCCTTGAAAGAAAATGTGAAGAGAGTTATGTTTTATTGTTAG 2907 0.4211 MPVRQMREGSEQHIVIKPHLQNPMNGAKKVPRAVQNGKGSPPPPLSQQELPHNQTSPHARNKGRRRSRGGGRKCDQGDVLMRPIVTSGVENGSTMCGEKEMSYPTSSKSLSFAPRPGYGQVGTKCIVKANHFFAELPDKDLNQYDVSITPEVSSKAVNRSIIAELVRLYKESDLGMRLPAYDGRKSLYTAGPLPFSWREFKIKVVDDEDGVNGSKREREYRVVIKFVARANLHHLGQFLAGKCADAPQETLQILDIVLRELSSKRFCPIGRSFFSPDIRTPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVVEYVDQLLGKDILSRQLSDADRIKIKKVLRGVKVEVTHRGSVRRKYRVSGLTSQPTRELVFPVDENSTMKSVVEYFQEMYGFTIKYSHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDRENDILQTIQQNAYDQDPYAKEFGIKISEKLASVEARILPAPWLKYNESGKEKNCLPQVGQWNMMNKKMINGMTVSQWACINFSRSVQDSVARTFCNELVQMCQVSGMEFNPEPVIPIYNAKSEHVEKALKYVYHVSTNKTKGKELELLLAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLVDAVSCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPELTKYAGLVCAQAHRQELIQDLYKMWHDPVRGLVSGGMIRDLLISFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDRNSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDLQQENGSSGGGSRATRAGGVKPLPALKENVKRVMFYC* 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0026 968 MobiDBLite consensus disorder prediction 89 108 - -
Gso10g0026 968 Gene3D - 677 968 IPR036397 GO:0003676
Gso10g0026 968 Pfam PAZ domain 346 450 IPR003100 GO:0005515
Gso10g0026 968 Gene3D paz domain 313 438 - -
Gso10g0026 968 PANTHER PROTEIN ARGONAUTE 10 62 967 - -
Gso10g0026 968 Pfam Argonaute linker 1 domain 268 317 IPR014811 -
Gso10g0026 968 SMART Piwi_a_2 608 929 IPR003165 GO:0003676
Gso10g0026 968 Gene3D - 498 671 - -
Gso10g0026 968 SUPERFAMILY Ribonuclease H-like 600 930 IPR012337 -
Gso10g0026 968 Pfam Argonaute linker 2 domain 460 506 IPR032472 -
Gso10g0026 968 CDD Piwi_ago-like 478 928 IPR045246 -
Gso10g0026 968 ProSiteProfiles PAZ domain profile. 320 434 IPR003100 GO:0005515
Gso10g0026 968 CDD PAZ_argonaute_like 319 433 - -
Gso10g0026 968 SMART DUF1785_2 267 319 IPR014811 -
Gso10g0026 968 Pfam N-terminal domain of argonaute 124 258 IPR032474 -
Gso10g0026 968 Pfam Mid domain of argonaute 517 594 IPR032473 -
Gso10g0026 968 ProSiteProfiles Piwi domain profile. 608 929 IPR003165 GO:0003676
Gso10g0026 968 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 62 967 - -
Gso10g0026 968 SUPERFAMILY PAZ domain 314 474 IPR036085 GO:0005515
Gso10g0026 968 Pfam Piwi domain 609 928 IPR003165 GO:0003676
Gso10g0026 968 MobiDBLite consensus disorder prediction 1 81 - -
Gso10g0026 968 SMART PAZ_2_a_3 324 456 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0026 Gso-Chr10 300810 310165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0026 1 968 Eukaryotic Initiation Factors Gene Family AT5G43810 79.758 0.0 1629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0026 K11593 - gmx:100819073 1880.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0025 2 290618 299879 Gso10g0026 10 300810 310165 GST