Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0011 ATGGCATGCAGCAGGGTAGCTAATTGGTGTGTAGCAGTAGCAGTATCACCATCAACTTTATTCCCCCGAATTTCTCCCACTCTTAATCCTAATCTTAATTATTTATCATCATCAGTAGCACCCACCCCTCTCTCTCTTTCTCTCACTGGCAGCAGAAGGTTTTCATCCTCACCCGTTTCAGCCATGGATAAGGAAGACGCAGCGGCGGCGGAGCAAGAATACGCACTTCACTCCACCTTACTCCTGGAATTCACCGCCATTTCCGCCATCGACAAGGCATGGCTCTTCAAATCCCACACTCACACCGCCTCGGCTTCTTCTTCGCATGCAATGTTCTGCGTTAGTCAACCCAACCTCTTGGTCAACAAGAGGAAGAAATCCATCGTCTCCGCCACCATTCTCACACAAAACGACGCCTCCTCCGTCACGTTTCAGTGGGCTCCGTTTCCGATCCAAGTTTCCGGAGTCTCCGCAATGGTTCCGTCTCCTTCTGGATCCAAGCTTCTAATCGTTCGAAATCCCGAGAGCGATGGCCCTTGCCGCTTCGAAATCTGGAGCTCCTCTCAACTCCAAAAGGAGTTCCATATCCCTCCATCTAAGCATGGTTCTGTCTACACTGATGGATGGTTTGAGGGAATTTCTTGGAATTCGGATGAAACTTGTATAGCGTATGTAGCTGAAGAGCCGGCCCCTACAAAGCCCACATTCAATGATCTGGGTGGCTACAAGAAAGCTGGTTCTTCAGAAAAGGATTGTGGTACCTGGAAAGGCCAAGGGGAGTGGGAGGAGGACTGGGGAGAGACATATGCAGGGAAGAGGCAGCCTGCGCCTTTTGTCATCAACATCAACAGTGGAGAAGTACAAGCAGTCAAAGGAATTGACAAGTCTTTGAGTGTCGGACAAGTTGTGTGGGCTCCATCAACTGAAGGCTCTGCGCAACATCTGGTTTTTGTTGGATGGACATTTGAGACAAGAAAGCTTGGTATTAAGTACTGCTATAACAGGCCATGTGCATTATATGTTGTTAAAGCACCACACCATGAGTCAAAAGCTAATGAAACTGAGATTCACTCAACTGAAGATGTTCAGGCTGTTAACCTAACTCAAACCATAAGTAGCGCTTTCTTTCCACGGTTCAGCCCAGATGGAAAGTTTCTTGTATTTGTATCTGCAAGAAGCTCGGTTGATTCTGGAGTCCATTCTGCTACTGATTCACTTCATAGAATTGATTGGCCTGAAGATTCAAAGCTTTATAAATCAGCTAAAATTCATGAAGTGATTCCAGTTGTGTTGTTTGCTGAGGATGGTGGCTTCCCTGGGCTTTACTGTTCAACTATCCTTAGTGATCCATGGCTTTCTGATGGCTACACTTTGGTTATAGCATCTATCTGGCACAGCAGTCAAGTTTTACTTTCCATCAATGTGTTGAGTGGAGAACTATTGCGTATCACCCCTGCTGACTCAAACTTCTCTTGGAGTCTCCTTGCATTGGATGGGAACAATATTCTTGCTGTTTCTAGCAGTCCAGTAGATGTTCCTCAAATCAAGTATGGAGCCATTGTTAAGAAGGCAGCTAATAATAAAGAATGGAGTTGGTCAGATGTCGCAAATCCCATATTTAAATGCTCTGACAAGGTTAGATCCTTGATCTCCTCTCTTACATTCAGTATAATGAAGATCTCAGTCAAGGATATTTCTGCTAGCTTAACAAAAGGTGCTAGTCAACCATATGAAGCTATATTTGTGTCATCAAAAACTAAGAAAAGTGATGCACTTGATCCACTAATTGTAGTTCTTCATGGGGGACCACACACTGTCTCATTGTCAAGCTTTTCAAAGCCACTGGCTTATCTTTCTTCCCTTGGATATAGCTTGTTAATTGTGAACTACAGAGGCTCATTAGGATTTGGTGAGGAAGCCTTGCAATCTCTTCCAGGGAAAGCTGGATCTCAGGATGTCAATGATGTGCTCACTGCTATTGATCACGTCATTAACTTGGGACTTGCCAGTCCTTCAAAGATTGCAGTCCTCGGTGGCTCACATGGTGGCTTTCTGACAACCCACTTGATTGGCCAGGCACCAGAGAAATTTGTTGCAGCAGCTGCTAGAAATCCTGTATGTAACCTTGCTCTGATGGTTGGTACAACTGATATCCCTGATTGGTGCTATGTGGAGACCTATGGTACAAAGGGGAGAGATAAGTTTACTGAAGCACCTTCAGCAGAAGATCTAACACTATTTTATAGCAAATCTCCTATTGCACACCTCTCAAAGGTAAAAACACCAACGATTTTTCTACTAGGTGCCCAAGATCTCCGTGTCCCAATTTCGACTGGACTACAATATGCTCGGGCTTTAAGGGAGAAAGGAGTACAGGTTAAAGTCATTGTGTTTCCAAATGATGTTCATGGAATTGAAAGGCCACAATCCGACTTTGAAAGCTACCTTAACATTGCGATGTGGTTCAACAAGTATTGCAAATGA 2484 0.4465 MACSRVANWCVAVAVSPSTLFPRISPTLNPNLNYLSSSVAPTPLSLSLTGSRRFSSSPVSAMDKEDAAAAEQEYALHSTLLLEFTAISAIDKAWLFKSHTHTASASSSHAMFCVSQPNLLVNKRKKSIVSATILTQNDASSVTFQWAPFPIQVSGVSAMVPSPSGSKLLIVRNPESDGPCRFEIWSSSQLQKEFHIPPSKHGSVYTDGWFEGISWNSDETCIAYVAEEPAPTKPTFNDLGGYKKAGSSEKDCGTWKGQGEWEEDWGETYAGKRQPAPFVININSGEVQAVKGIDKSLSVGQVVWAPSTEGSAQHLVFVGWTFETRKLGIKYCYNRPCALYVVKAPHHESKANETEIHSTEDVQAVNLTQTISSAFFPRFSPDGKFLVFVSARSSVDSGVHSATDSLHRIDWPEDSKLYKSAKIHEVIPVVLFAEDGGFPGLYCSTILSDPWLSDGYTLVIASIWHSSQVLLSINVLSGELLRITPADSNFSWSLLALDGNNILAVSSSPVDVPQIKYGAIVKKAANNKEWSWSDVANPIFKCSDKVRSLISSLTFSIMKISVKDISASLTKGASQPYEAIFVSSKTKKSDALDPLIVVLHGGPHTVSLSSFSKPLAYLSSLGYSLLIVNYRGSLGFGEEALQSLPGKAGSQDVNDVLTAIDHVINLGLASPSKIAVLGGSHGGFLTTHLIGQAPEKFVAAAARNPVCNLALMVGTTDIPDWCYVETYGTKGRDKFTEAPSAEDLTLFYSKSPIAHLSKVKTPTIFLLGAQDLRVPISTGLQYARALREKGVQVKVIVFPNDVHGIERPQSDFESYLNIAMWFNKYCK* 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0011 827 Pfam Prolyl oligopeptidase family 610 826 IPR001375 GO:0006508|GO:0008236
Gso10g0011 827 Pfam Acylamino-acid-releasing enzyme, N-terminal domain 71 349 IPR045550 -
Gso10g0011 827 SUPERFAMILY DPP6 N-terminal domain-like 144 511 - -
Gso10g0011 827 Gene3D alpha/beta hydrolase 517 826 IPR029058 -
Gso10g0011 827 Pfam WD40-like Beta Propeller Repeat 374 398 IPR011659 -
Gso10g0011 827 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 63 827 - -
Gso10g0011 827 Gene3D - 339 396 IPR015943 GO:0005515
Gso10g0011 827 ProSitePatterns Prolyl endopeptidase family serine active site. 655 685 IPR002471 GO:0004252|GO:0006508
Gso10g0011 827 PANTHER ENZYME-LIKE PROTEIN, PUTATIVE-RELATED 63 827 - -
Gso10g0011 827 SUPERFAMILY alpha/beta-Hydrolases 588 826 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0011 Gso-Chr10 132821 147643 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0011 594 810 Carbohydrate Esterase AT5G36210 26.728 1.75e-18 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0011 K01303 - gmx:100803600 1628.61