Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0003 ATGGACACATCATTGGTGTTTACCGTGAGGAGGCGTGAGCCAGAGCTGATAGCTCCGGCGAAACCCACCCCTCGCGAAGTGAAGCTACTATCCGACATAGATGACCAAGATGGGTTACGGTTCCAAATTCCGGTGATACAGATCTATCGCCACGACCCATCCATGGCAGGGAAAGACCCTGTTGAGGTTATCAGAAAGGCTTTGGCCAAAACGCTTGTGTTCTACTATCCTTTTGCTGGTAGGCTCAGGGAAGGACGTGATCGGAAACTGATGGTGGATTGTACTGGGGAATTAGGTGTTTTGTTCATTGAGGCTGATGCAGATGTCACTCTTAAGCATTTTGGTGATGCTCTTCAACCTCCTTTCCCATGCTGGGAGGAACTCCTTTATGATGTTCCTGGTTCCCAAGGAGTTCTTAACACTCCCCTCCTGCTTATACAGGTAACGCGGCTCAAGTGCGGGGGTTTCATATTGACTCTCCGGCTGAACCACACGATGAGCGACGCAGCCGGTCTGGTCCAATTCATGAGCGCGCTGGGCGAAATAGCTCGCGGGAGGCACGAGCCATCGGTCCCACCACTGTGGCGCAGAGAGCTCCTGAACGCGCGGGACCCACCAAGAGTCACGTGCACCCACCGCGAATACGAACAAGTCCCCGACACCAAAGGCACCATCATCCCCTTAGACGACATGGCCCATCGCTCTTTCTTCTTCGGCCCCAGCGAGGTGTCCGCCATCCGCCGCCTCATCCCACGCGCCGATCAATGCTCCTCCTCCAACTTCGAGGTTCTCACCGCATGCCTTTGGCGCTGCCGCACCATAGCGCTGCAGCCAGACAAAGACGAGGAGGTTCGCATCCTCTGCATAGTCAACGCGCGCGCCAAGTTTGACCCACCTTTACCAAGTGGTTACTACGGCAACGCTTTTGCGTTCCCCGCTGCGGTCACCACTGCAGGGAAGCTGTGCGAGAATCCTTTGGGATACGCTGTCGAGTTGGTGAGAAAAGCGAAAGCGGACGTGACTGAGGAATACATGCACTCGGTGGCGAATTTAATGGTGGCCAAGGGACGGCCTCACTTCACTGTTGTGAGATCCTATGTTGTGTCAGATGTGACTCGTGCTGGGTTTGGAAACGTTGAGTTTGGGTGGGGGAAGGCTGTTTATGGAGGACCCGCCAAGGGAGGGGTTGGAGCCATACCTGGTGTTGCTAGCTTTTACATACCTTTCAAGAATGCTAAAGGAGAGGAAGGGTTGGTTATACCGGTTTGTTTGCCGTCTGAGGCCATGGAGAGGTTTCAGAAGGAGTTGAACAGTGTGGTTAACAACCACATCGTCCAACCTAGCATCATTGTTTCTTCCTTGTAG 1365 0.5392 MDTSLVFTVRRREPELIAPAKPTPREVKLLSDIDDQDGLRFQIPVIQIYRHDPSMAGKDPVEVIRKALAKTLVFYYPFAGRLREGRDRKLMVDCTGELGVLFIEADADVTLKHFGDALQPPFPCWEELLYDVPGSQGVLNTPLLLIQVTRLKCGGFILTLRLNHTMSDAAGLVQFMSALGEIARGRHEPSVPPLWRRELLNARDPPRVTCTHREYEQVPDTKGTIIPLDDMAHRSFFFGPSEVSAIRRLIPRADQCSSSNFEVLTACLWRCRTIALQPDKDEEVRILCIVNARAKFDPPLPSGYYGNAFAFPAAVTTAGKLCENPLGYAVELVRKAKADVTEEYMHSVANLMVAKGRPHFTVVRSYVVSDVTRAGFGNVEFGWGKAVYGGPAKGGVGAIPGVASFYIPFKNAKGEEGLVIPVCLPSEAMERFQKELNSVVNNHIVQPSIIVSSL* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0003 454 Pfam Transferase family 9 436 - -
Gso10g0003 454 Gene3D - 216 436 IPR023213 -
Gso10g0003 454 PANTHER - 8 443 - -
Gso10g0003 454 Gene3D - 8 215 IPR023213 -
Gso10g0003 454 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0003 Gso-Chr10 43904 47155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0003 9 436 Monolignol Biosynthesis Gene Families AT5G48930 29.438 8.72e-51 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0003 K19861 - gmx:100799685 917.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0012 2 142944 144885 Gso10g0003 10 43904 47155 GST