Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g02318 ATGGGTTGTTTTTCGTGCTTCGATTCGCGGGAGGACGAGAAGCTGAATCCCAATCCTCAGCAGGAAAACCACCAGcatgaacatgaacatgaacatgaacatgaTCTTAAGCCCCCTGTTCCTTCTCGTATATCCAGATTGCCGCcctctgcctctgcctctgcctctgcctctgCAGTAGGAGCAGACAAGCTACGCTCAACAACAAGTAATGGTAATGGAGAGTCCACTGCTGTTCAAATTGCGGCTCAAACATTCAGTTTCCGTGAGCTTGCAGCCGCAACGAAAAACTTCAGGCCCCAATCCTTTTTGGGTGAAGGTGGTTTTGGAAGGGTCTACAAGGGCCGCCTGGAAACCACCGGTCAGGTTGTGGCTGTTAAACAGTTAGACAGAAACGGTCTTCAGGGTAATCGGGAATTCCTCGTCGAGGTTCTCATGCTCAGTCTTCTACACCACCCTAATCTTGTCAATCTCATTGGATACTGTGCCGATGGGGACCAACGCCTCTTAGTTTATGAATTTATGCCTTTTGGATCTTTGGAGGACCACCTTCATGATCTTCCCCCGGACAAGGAACCATTAGATTGGAACACCAGGATGAAAATAGCTGCTGGGGCAGCAAAAGGATTGGAATACCTTCACGACAAAGCAAACCCTCCTGTCATTTATAGAGACTTCAAATCATCTAATATATTACTTGATGAAGGTTATCATCCAAAGCTTTCAGACTTTGGTCTTGCAAAGCTTGGTCCAGTTGGTGACAAATCACACGTTTCAACCCGTGTCATGGGAACTTATGGTTACTGTGCCCCAGAATATGCTATGACTGGACAGCTGACTGTGAAGTCTGATGTATATAGTTTTGGGGTAGTCTTCTTGGAGCTGATTACTGGCCGTAAAGCCATTGACAGCACTCGACCCCATGGAGAACAAAACCTTGTCACATGGGCACGTCCACTGTTCAGTGACCGCAGGAAGTTTCCAAAGTTAGCAGATCCACAGCTGCAGGGACGGTATCCCATGCGGGGTCTTTACCAAGCTCTAGCTGTGGCATCAATGTGCATTCAAGAACAGGCTGCAGCACGTCCACTCATTGGGGATGTGGTGACAGCCCTTTCTTTTCTGGCCAACCAGGCATATGACCATAGGGGAGCTGGTGATGATAAAAAGAACAGGGATGATAAAGGTGGAAGAATATTGAAAAATGATGTAGGTGGAGGATCTGGACGCAGATGGGATTTGGAAGGATCTGAGAAAGATGACTCCCCACGTGAAACTGCAAGGATGTTAAACAACAGGGATCTTGATAGAGAACGTGCCGTGGCTGAAGCCAAGATATGGGGAGAGAATTGGAGAGAAAAAAGACGACAAAGTGCGCAGGGCAGTTTTGATGGTTCTAACGCTTAG 1407 0.4549 MGCFSCFDSREDEKLNPNPQQENHQHEHEHEHEHDLKPPVPSRISRLPPSASASASASAVGADKLRSTTSNGNGESTAVQIAAQTFSFRELAAATKNFRPQSFLGEGGFGRVYKGRLETTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPFGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGYHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFSDRRKFPKLADPQLQGRYPMRGLYQALAVASMCIQEQAAARPLIGDVVTALSFLANQAYDHRGAGDDKKNRDDKGGRILKNDVGGGSGRRWDLEGSEKDDSPRETARMLNNRDLDRERAVAEAKIWGENWREKRRQSAQGSFDGSNA 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g02318 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Gma20g02318 468 ProSitePatterns Protein kinases ATP-binding region signature. 104 127 IPR017441 GO:0005524
Gma20g02318 468 CDD STKc_IRAK 104 372 - -
Gma20g02318 468 MobiDBLite consensus disorder prediction 412 435 - -
Gma20g02318 468 PANTHER OS07G0668900 PROTEIN 1 463 - -
Gma20g02318 468 Gene3D Phosphorylase Kinase; domain 1 58 174 - -
Gma20g02318 468 ProSiteProfiles Protein kinase domain profile. 98 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g02318 468 PANTHER SERINE/THREONINE-PROTEIN KINASE PBS1 1 463 - -
Gma20g02318 468 Gene3D Transferase(Phosphotransferase) domain 1 175 396 - -
Gma20g02318 468 MobiDBLite consensus disorder prediction 385 435 - -
Gma20g02318 468 SUPERFAMILY Protein kinase-like (PK-like) 75 374 IPR011009 -
Gma20g02318 468 MobiDBLite consensus disorder prediction 47 76 - -
Gma20g02318 468 MobiDBLite consensus disorder prediction 1 76 - -
Gma20g02318 468 MobiDBLite consensus disorder prediction 7 40 - -
Gma20g02318 468 Pfam Protein kinase domain 101 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g02318 468 MobiDBLite consensus disorder prediction 385 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g02318 Gma-Chr20 50217346 50222580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g02318 1 456 Glycoside Hydrolase AT3G07070 56.893 4.94e-172 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Gma20g02318 Pkinase 4.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g02318 K13430 - gmx:100777987 867.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02792 10 55015706 55018753 Gma20g02318 20 50217346 50222580 GST