Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g02316 ATGTTCATGACTTTAAGGGAAGACATTGTTGGGGAGTTTTATTTGGAGCCGTGTACAAAAGAGCTAGCGTATGAGACAACCACTACAAAGGACATGATAATAGAGGCTATTGTCGCCATGTTTTGTGATTTGAAAAACTCCATCAAGAATGATAATGAAAGGATTCATGTCCTTAACAGTGCAATTCATCCCTTAACTCGTTATGTTATGAATTATCTTAAATATGCATGTGAGTACAAAGATACCTTGGAGCAAGTATTCGAGCAAGGTCAAGGTGTCAACATTGAAGGGATTGAGATTCAAAATCACAAATCCGTTCATGAAGAAGTGGAAGATGTAGGGACGCCCAAGAATTCACCTTTTACTGGTCAATTGATGACCATCATGGACCTTTTGGATGCAAATGTAGAAAGGAAATAA 420 0.3786 MFMTLREDIVGEFYLEPCTKELAYETTTTKDMIIEAIVAMFCDLKNSIKNDNERIHVLNSAIHPLTRYVMNYLKYACEYKDTLEQVFEQGQGVNIEGIEIQNHKSVHEEVEDVGTPKNSPFTGQLMTIMDLLDANVERK 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g02316 139 Gene3D Exocyst complex component Exo70 1 139 - -
Gma20g02316 139 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 139 IPR004140 GO:0000145|GO:0006887
Gma20g02316 139 Pfam Exo70 exocyst complex subunit 20 139 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gma20g02316 139 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 1 139 - -
Gma20g02316 139 SUPERFAMILY Cullin repeat-like 16 139 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g02316 Gma-Chr20 50214130 50214549 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g02316 1 139 EXO70 exocyst subunit family AT5G13990 42.553 4.75e-29 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g02316 K07195 - gmx:100784339 241.891