Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g02294 ATGAGTGGTTCTCGCAGATGCAATGGCGATTGCCATGGCGATCAGAACCCAGCTACTCGCAGGGTCATACGCTCCCAGTTCCTCCAACTCAAGAATTTCATCAATGAGAAAAGAGATGATTTGATGAACACGGAGTCCGACAAGTTCGACACCATCTTGGATGAGTTCGACAAGTTACACGTCCAAGTTGAGAAGCCGAGGGAGCAAGTTGCAGATGCGGAGGCACTGCTGGATCTCACACGCACTCTAGTGGGATCTGTTAAGTCGTTGACGAATGAGGGCGTCACACCTTCTCAATTTGTTTCATCTTTGCTCATACGCTACGCCCACGCCCAACACTCAATTGATTGGCACCAACTTGGCCTTGCCGCCTCCCCAATCTTCCTCTCCTTTCATGGCTCTTCTACCATGCTTGGTCCCATGGACAACCAGTTTAAGCAACGCAAAACTGGAGTGCCCAGAAACCGCAATCCTCGCCAAATTGCAACTACTAGACCTCTACAGGTTGATGAGGCTGTTACAGAGGAAAATACTGATACCGACAAAAACATGGCCACTATGTTTCACATCTTAAGGAGGACAAAGCGTGTCCCACTTGAAAACTTAATTTTGAACAGGGAGTCTTTTGCTCAGACTGTGGAAAACTTGTTTGCCCTATCATTCCTAGTGAAAGATGGACGTGCTGAGATCAGTCTTGATGAAAATCGTTTGCACTATGTTTCACCTAAAAATGCTCCAGCTGCCAACTTAGTATCATCAAAAGAAGTTTCTTATACTCATTTTGTATTCAGATATGATTACCAAGATTGGAAGTTAATGAAAGATGTGGTGCCTGATGGAAAAGAATTAATGCCACGCCGGACTCAATGTTGCACTGTAGTTGCCTCCCAGGAAGGTATGAGTGATGACAATTTCCAACCTGCTTTGGCTGTAACACCCATCAGGAAGCTATCACGGAACCGAGGTCGGGTTGTGCAGGAGGAAGGTGTTGTAGAAGAATCTCCTGAATGCAATGAGGAAAATGCTTCCAGAGCAGGGGCAATTCGTAGGTGTAAGCGTAAGCTTCATTAA 1071 0.4603 MSGSRRCNGDCHGDQNPATRRVIRSQFLQLKNFINEKRDDLMNTESDKFDTILDEFDKLHVQVEKPREQVADAEALLDLTRTLVGSVKSLTNEGVTPSQFVSSLLIRYAHAQHSIDWHQLGLAASPIFLSFHGSSTMLGPMDNQFKQRKTGVPRNRNPRQIATTRPLQVDEAVTEENTDTDKNMATMFHILRRTKRVPLENLILNRESFAQTVENLFALSFLVKDGRAEISLDENRLHYVSPKNAPAANLVSSKEVSYTHFVFRYDYQDWKLMKDVVPDGKELMPRRTQCCTVVASQEGMSDDNFQPALAVTPIRKLSRNRGRVVQEEGVVEESPECNEENASRAGAIRRCKRKLH 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g02294 356 PANTHER UNCHARACTERIZED 16 355 IPR027786 GO:0005634|GO:0006281|GO:0030915
Gma20g02294 356 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 16 355 - -
Gma20g02294 356 Pfam Nse4 C-terminal 197 279 IPR014854 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g02294 Gma-Chr20 50043710 50046054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g02294 20 355 Non-SMC Element family AT1G51130 51.149 6.70e-114 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g02294 K22825 - gmx:100817716 684.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02774 10 54843056 54845205 Gma20g02294 20 50043710 50046054 GST