Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g02282 ATGATTGGATGGATTGGTGGAATAAGAGGCATCCTAAGATACAGAGACTATCACCATCGTCCTGCTCATTTGGCACATGCTTCTCCCCCTGAATACTTTGTCCGCCTGGAGAACACAACTTACAAAGACGATCTATATTTAAGGAAGAGGACAAGGATGCGTCGGTGGCTTTGTTGTACTTGTCAGGTGGAAGAGTCTTACCCATCAAATGAAAATGAACACCTGAAAAGCCCAAGGAATTATGGAGATGGCAACCAAAAAGGCTCAAAGGTGTCAGCTCCTGTCAAACCTGAAACACAAAAGGCACCTCCACCTATTGAAGCTCCAGCCTTGTCTTTAGATGAGCTGAAGGAGAAGACTGACAACTTTGGTTCAAAGGCATTAATAGGTGAAGGATCGTATGGAAGGGTGTATTATGCAACCTTAAACAATGGGAAAGCAGTGGCTGTGAAAAAGCTTGATGTTTCATCTGAACCCGAATCAAATAATGAGTTTTTGACCCAGGTTTCCATGGTCTCAAGATTGAAGGATGACAATTTTGTTGAGATGCATGGTTACTGTGTTGAAGGAAATCTTCGTGTACTTGCATATGAGTTTGCTACTATGGGCTCTCTTCATGACATATTGCACGGTAGAAAGGGAGTTCAAGagatatCCGATCAAGCCCCTGACATGGCTGCACGTCTTCATTCAACTCGTGTATTGGGAACTTTTGGTTATCATGCTCCAGAATATGCAATGACTGGGCAGttgactcaaaaaagtgatgtctatagttttggtgttgttcttcttgaGCTTCTTACAGGAAGAAAACCTGTTGACCATACCATGCCTAGAGGACAGCAGAGTCTTGTCACATGGGCTACTCCAAGATTAAGTGAAGATAAAGTGAAACAGTGCGTTGACCCAAAACTGAAGGGAGAATACCCCCCCAAAGGAGTTGCTAAGCTTGGAGCTGTTGCGGCACTGTGCGTGCAGTATGAAGCTGAGTTTAGGCCAAATATGAGCATTGTTGTTAAAGCACTCCAACCACTTCTGAAGTCTCCTGCTCCTGCTCCTGCTCCTGTTCCAGAAAGTTGA 1083 0.4247 MIGWIGGIRGILRYRDYHHRPAHLAHASPPEYFVRLENTTYKDDLYLRKRTRMRRWLCCTCQVEESYPSNENEHLKSPRNYGDGNQKGSKVSAPVKPETQKAPPPIEAPALSLDELKEKTDNFGSKALIGEGSYGRVYYATLNNGKAVAVKKLDVSSEPESNNEFLTQVSMVSRLKDDNFVEMHGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQEISDQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYPPKGVAKLGAVAALCVQYEAEFRPNMSIVVKALQPLLKSPAPAPAPVPES 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g02282 360 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 218 356 - -
Gma20g02282 360 SUPERFAMILY Protein kinase-like (PK-like) 107 354 IPR011009 -
Gma20g02282 360 Gene3D Transferase(Phosphotransferase) domain 1 202 352 - -
Gma20g02282 360 PANTHER PTI1-LIKE TYROSINE-PROTEIN KINASE 3 ISOFORM X2 218 356 - -
Gma20g02282 360 MobiDBLite consensus disorder prediction 69 107 - -
Gma20g02282 360 Gene3D Phosphorylase Kinase; domain 1 88 199 - -
Gma20g02282 360 ProSitePatterns Protein kinases ATP-binding region signature. 129 152 IPR017441 GO:0005524
Gma20g02282 360 Pfam Protein tyrosine and serine/threonine kinase 238 343 IPR001245 GO:0004672|GO:0006468
Gma20g02282 360 Pfam Protein tyrosine and serine/threonine kinase 128 215 IPR001245 GO:0004672|GO:0006468
Gma20g02282 360 ProSiteProfiles Protein kinase domain profile. 123 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g02282 360 PANTHER PTI1-LIKE TYROSINE-PROTEIN KINASE 3 ISOFORM X2 39 216 - -
Gma20g02282 360 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 39 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g02282 Gma-Chr20 49960997 49965087 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g02282 70 350 Glycoside Hydrolase AT3G07070 36.905 1.16e-56 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Gma20g02282 PK_Tyr_Ser-Thr 3e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g02282 K13436 - gmx:548003 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02766 10 54797058 54802069 Gma20g02282 20 49960997 49965087 GST