Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g02246 ATGGAGGATTTCTTTGAGACCAAAATATCAGAGGCTGATGGTCAGACAGTTGCATTTTTTGGTGTTTTTGATGGTCATGGAGGTTCCCGGACTGCAGAATATCTGAAAAGTAATCTGTTTAAGAATTTGAGTAGCCACCCTGACTTTATCAAAGACACAAAGACTGCTATAGTTGAAGCATTTAAACAGACAGATGTTGATTACCTCAATGAGGAAAAGGGGCATCAAAGGGATGCTGGGTCCACTGCATCAACAGCTGTGTTGTTGGGGGACCGGATTGTTGTTGCAAATGTTGGTGTGATTCCAGAGTGGTTGCATGTAGAGCTGGCTCAGGTTGATGCCATGTCAGTTATGTGTATTGTTCCTTTGTCCATTGATCACAAACCTGATAGATCCAATGAACGTCAAAGGATTGAACAGGCTGGTGGATTCATAATTTGGACCGGAACATGGAGAGTTGGTGGTGTTCTTGCTGTTTCCCGTGCATTTGGAAACAAACTTCTTAAGCCCTATGTTGTTGCTGACCCAGAAATTCAGGAGGAAGAAATTGACGGAGTCGATTTTATTATAATTGCTAGTGGTGGCCTTTGGAATGTCATATTAAACAAGGCCGTGTCTTTAGTACAAAATATCACAGATGCAGAAGTGGCGTCCCCAGAGAACTTATAA 669 0.423 MEDFFETKISEADGQTVAFFGVFDGHGGSRTAEYLKSNLFKNLSSHPDFIKDTKTAIVEAFKQTDVDYLNEEKGHQRDAGSTASTAVLLGDRIVVANVGVIPEWLHVELAQVDAMSVMCIVPLSIDHKPDRSNERQRIEQAGGFIIWTGTWRVGGVLAVSRAFGNKLLKPYVVADPEIQEEEIDGVDFIIIASGGLWNVILNKAVSLVQNITDAEVASPENL 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g02246 222 ProSitePatterns PPM-type phosphatase domain signature. 19 27 IPR000222 GO:0043169
Gma20g02246 222 Pfam Protein phosphatase 2C 12 214 IPR001932 -
Gma20g02246 222 Gene3D - 1 220 IPR036457 -
Gma20g02246 222 CDD PP2Cc 1 210 IPR001932 -
Gma20g02246 222 PANTHER ALPHABET, ISOFORM E-RELATED 1 218 - -
Gma20g02246 222 SUPERFAMILY PP2C-like 1 205 IPR036457 -
Gma20g02246 222 ProSiteProfiles PPM-type phosphatase domain profile. 1 222 IPR001932 -
Gma20g02246 222 PANTHER PROTEIN PHOSPHATASE 2C 11-RELATED 1 218 - -
Gma20g02246 222 SMART PP2C_4 2 217 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g02246 Gma-Chr20 49566839 49570285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g02246 1 218 PP2C-type Phosphatase Gene Family AT1G43900 66.667 1.17e-100 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g02246 K17506 - gmx:100776867 355.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02731 10 54482504 54492964 Gma20g02246 20 49566839 49570285 GST