Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g02234 ATGATGGGTTCGAGGGGACTGTTCGGGTGGTCCCCGCCGCACATACAGCCTCTCACGCCCGTCTCTGAGGTGTCGGAGCCGCCGGAGTCGCCGTCGCCTTACCTCGACCTCGGTGCCGAGACCTCCGCAACTCAGCCTATGGAGGTCGAGGAGGAGATGGAGGAGGCCGACGAGATTGAGCCGCCGCCCGCCGCCGTTCCTTTCTCCCGCCTCTTCGCCTGCGCTGACCACCTCGATTGGTTTCTTATGCTCGTCGGCTCCATCGCCGCCGCCGCACACGGCACTGCTCTCGTTGTTTACTTGCACTACTTCGCCAAGGTTCTCCGGGTTCCACAGCAGGGTTTGCCGGAAGAGCAGTTTCACAGGTTTAAAGAGCTTGCTTTAACCATTGTTTATATTGCTGGGGGAGTTTTTGCTGCTGGTTGGATTGAGGTTTCGTGTTGGATTCTTACTGGAGAACGGCAGACTGCTGTCATCAGATCAAAATATGTCCAAGTATTACTTAACCAAGATATGAGTTTTTTTGATACTTATGGAAATAACGGAGACATTGTGAGTCAAGTATTGAGTGATGTGCTGCTCATTCAGTCTGCTCTTAGTGAAAAGGTTGGGAATTATATTCATAATATGGCAACATTCTTCAGTGGTCTTGTTATTGCTTTTATCAATTGTTGGCAGATTGCATTGATAACATTAGCTACAGGTCCATTTATTGTTGCTGCAGGAGGAATATCAAATATATTCCTCCATAGGCTTGCCGAGAATATTCAAGATGCATATGCTGAAGCAGCCAGCATTGCTGAACAGGCAGTTTCATATATAAGGACCTTATATGCATTTACAAATGAAACATTGGCCAAATATTCATACGCAACATCACTGCAAGCTACTCTTAGATATGGTATATTAATAAGTCTCGTTCAAGGCCTTGGCCTTGGTTTTACATATGGGCTTGCAATATGTTCTTGTGCATTACAACTCTGGGTTGGAAGGCTCTTGATTATACATGGAAAAGCTCATGGTGGTGAAATTATAACAGCTCTGTTTGCTGTGATTCTAAGTGGCTTGGGATTGAATCAAGCTGCAACAAATTTCTACTCATTTGATCAAGGGCGAATAGCTGCCTATAGACTGTTTGAGATGATAAGCCGGTCATCCTCATCTTTTAATCATGATGGCAGTGCTCCAGCTTCTGTCCAAGGAAATATAGAGTTTCGGAATGTTTACTTCAGTTATCTTTCTCGCCCTGAAATCCCTATCTTGAGTGGGTTTTATCTCACTGTTCCTGCTAAAAAAACTGTGGCACTTGTTGGCAGAAATGGCTCTGGAAAAAGTAGTATTATTCCCCTCATGGAGCGGTTCTATGATCCAACTTTAGGGGAAGTTCTTTTAGATGGTGAAAACATAAAGAATATGAAACTGGAATGGCTAAGGAACCAAATAGGACTGGTCACCCAGGAACCTGCTTTGCTCAGTTTGAGTATAAGAGACAACATTGCTTATGGGCGAGATACCACCATGGATCAAATTGAAGAGGCTGCTAAAATAGCTCATGCACATACCTTTATCAGCTCATTAGATAAAGGTTATGACACACAGGTTGGCAGGGCTGGTCTAGCTTTGACAGAAGAGCAGAAAATAAAACTTTCTATTGCAAGAGCTGTGCTTTTAAATCCATCCATTCTTTTGCTTGATGAGGTTACTGGTGGACTTGATTTTGAGGCTGAGAGGTCTGTTCAGGAGGCTCTGGATCTCCTCATGTTGGGACGCTCAACAATCATAATTGCTCGAAGGCTTAGTCTTATAAAGAATGCTGATTATATAGCTGTTATGGAGGATGGTCAACTGGTTGAGATGGGTACTCATGATGAGTTACTCACCCTGGATGGCTTATACGCAGAGCTTCTTCGATGTGAAGAGGCCACAAAACTTCCTAAGAGGATGCCTGTTCGAAACTACAAGGAGACTGCAACTTTCCAAATTGAGAAAGATTCTTCAGAAAGTCATAGCTTCAAAGAACCTTCATCTCCTAAAATGATAAAGTCACCCTCTCTTCAGAGAGTTTCTGCCATATTTCGGCCTTCAGATGGCTTCTTCAACTCACAAGAATCACCAAAAATCCGGAGCCCACCTTCTGAGAAGTTGATGGAGAATGGCCAGTCTTTAGATTCATCAGATAAGGAGCCATCAATAAAAAGGCAGGATAGTTTTGAAATGAGACTACCAGAGTTACCCAAGATTGATGTTCAATGTGTGCATCGACAAACATCAAATGGTTCTGATCCAGAATCTCCCATTTCACCTCTTTTAACGTCCGACCCTAAAAATGAACGCTCCCATTCACAGACTTTTAGCAGACCTGATTGTCATTCTGATGATCTTTTGGTGAAAATGAGTGAAACAAAGGATGCAAGGCATCGAAAACAACCCTCAATTTGGAGGCTAGCAGAGCTTAGTTTTGCAGAGTGGCTTTATGCTGTGTTAGGAAGCATAGGTGCTGCTATCTTTGGTTCTTTCAATCCCCTTCTTGCTTATGTTATTGGTCTGGTGGTGACAGACTATTATAGAATTGATGAAGCTCAGCACTTACAAGGGGAGATAAACAAATGGTGCTTGATCATTGCCTGCATGGGTATTGTGACAGTTGTTGCCAACTTTTTACAGCATTTCTATTTTGGTATTATGGGGGAGAAAATGACAGAAAGAGTTAGGAGAATGATGTTCTCAGCCATGCTTCGCAATGAAACTGGATGGTTTGATGAAGAGGAAAATAGTGCTGACAATTTATCCATGCGCTTGGCCAATGATGCTACATTTGTGCGAGCAGCATTCAGTAACCGACTTTCCATATTTATTCAGGACAGTGCTGCTGTTATTGTTGCTTTTCTCATTGGTGTTTTGCTGCACTGGCGATTAGCACTTGTGGCCTTAGCAACACTTCCAGTTCTTTGTGTTTCTGCTCTTGCCCAGAAATTGTGGCTTGCTGGCTTTTCAAAGGGCATACAGGAAATGCACAGAAAGGCATCTTTGGTTCTTGAAGATGCAGTTAGGAATATTTACACTGTTGTTGCATTTTGTGCTGGTAATAAGGTGATGGAACTCTACCAGTTGCAGTTAAATAAAATATTTAAGCAAAGCTTTCTTCATGGAGTGGCCATTGGTTTTGGATTTGGCTTTTCACAGTTTCTGCTCTTTGCTTGTAATGCCCTTCTACTTTGGTACACTGCACTATGTGTAAATAAGAGTTATGTGGATCTACCTACTGCTCTCAAGGAGTACATTGTTTTCTCATTTGCTACATTTGCCCTTGTGGAGCCTTTCGGGTTGGCTCCTTACATACTTAAGCGACGTAAATCTCTCATGTCAGTGTTTGAAATTATAGATCGTGTGCCTAAGATTGATCCTGATGATAGCTCAGCACTGAAGCCACCCAATGTATATGGAAGCATTGAGTTGAAAAATATTGATTTTTGTTATCCTTCTCGACCTGAAGTGTTGGTATTAAGCAATTTTAGTCTCAAAGTCAATGGAGGACAAACAATTGCTGTAGTGGGAGTTTCGGGATCAGGGAAGAGCACAATAATATCTTTGATTGAGAGATTCTATGATCCAGTTGCCGGCCAAGTTTTGCTAGATGGGAGGGATTTAAAACAATATAATTTGAGATGGTTGAGGAGCCACCTTGGTTTGGTTCAGCAGGAACCAATTATCTTCTCAACTACCATAAGGGAAAACATCATATATGCCAGGCATAATGCCAGTGAAGCTGAAATGAAGGAGGCTGCAAGAATAGCAAATGCTCACCATTTCATTAGTAGCTTGCCTCATGGTTATGACACTCATGTTGGGATGAGAGGTGTTGACTTAACTCCAGGACAAAAACAGAGAATTGCAATTGCAAGGGTAGTGCTTAAAAATGCTCCTATTTTGTTGTTGGATGAAGCTAGTTCATCAATTGAATCTGAGTCAAGCCGAGTGGTGCAAGAGGCTCTAGACACCCTAATAATGGGAAACAAGACCACTATTTTAATAGCACACAGGGCTGCGATGATGAGGCATGTGGACAACATAGTAGTTCTAAACGGAGGAAGGATAGTGGAGGAGGGGACCCATGATTCATTGGTGGCAAAAAATGGTCTGTATGTCCGATTGATGCAACCTCATTTTGGTGGAGGCTTGCATGTAGCAAGAATGGGAGTATTGGATCAGCACTCGGCATTGGTTGGCATAAGAAGAGGGTACTGTGGCAGGGGTAGTGTAGGAATTAAAGATAGGAATTTGGAATTTGGTTGCTTTGAGACTTTAGTATTGAAGCTGAGGATGCATATTCTTTTGGAGGCAAGCAGTTTAGACTGA 4356 0.4284 MMGSRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDLGAETSATQPMEVEEEMEEADEIEPPPAAVPFSRLFACADHLDWFLMLVGSIAAAAHGTALVVYLHYFAKVLRVPQQGLPEEQFHRFKELALTIVYIAGGVFAAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIAFINCWQIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRLLIIHGKAHGGEIITALFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSSFNHDGSAPASVQGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNMKLEWLRNQIGLVTQEPALLSLSIRDNIAYGRDTTMDQIEEAAKIAHAHTFISSLDKGYDTQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERSVQEALDLLMLGRSTIIIARRLSLIKNADYIAVMEDGQLVEMGTHDELLTLDGLYAELLRCEEATKLPKRMPVRNYKETATFQIEKDSSESHSFKEPSSPKMIKSPSLQRVSAIFRPSDGFFNSQESPKIRSPPSEKLMENGQSLDSSDKEPSIKRQDSFEMRLPELPKIDVQCVHRQTSNGSDPESPISPLLTSDPKNERSHSQTFSRPDCHSDDLLVKMSETKDARHRKQPSIWRLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLVVTDYYRIDEAQHLQGEINKWCLIIACMGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNETGWFDEEENSADNLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAFLIGVLLHWRLALVALATLPVLCVSALAQKLWLAGFSKGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYQLQLNKIFKQSFLHGVAIGFGFGFSQFLLFACNALLLWYTALCVNKSYVDLPTALKEYIVFSFATFALVEPFGLAPYILKRRKSLMSVFEIIDRVPKIDPDDSSALKPPNVYGSIELKNIDFCYPSRPEVLVLSNFSLKVNGGQTIAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKQYNLRWLRSHLGLVQQEPIIFSTTIRENIIYARHNASEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLVAKNGLYVRLMQPHFGGGLHVARMGVLDQHSALVGIRRGYCGRGSVGIKDRNLEFGCFETLVLKLRMHILLEASSLD 1451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g02234 1451 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1139 1386 IPR027417 -
Gma20g02234 1451 Gene3D ABC transporter type 1, transmembrane domain 70 654 IPR036640 GO:0005524|GO:0016021
Gma20g02234 1451 Gene3D ABC transporter type 1, transmembrane domain 1102 1147 IPR036640 GO:0005524|GO:0016021
Gma20g02234 1451 MobiDBLite consensus disorder prediction 661 731 - -
Gma20g02234 1451 Coils Coil 249 269 - -
Gma20g02234 1451 Pfam ABC transporter 424 568 IPR003439 GO:0005524
Gma20g02234 1451 MobiDBLite consensus disorder prediction 754 790 - -
Gma20g02234 1451 SUPERFAMILY ABC transporter transmembrane region 814 1135 IPR036640 GO:0005524|GO:0016021
Gma20g02234 1451 Pfam ABC transporter 1168 1316 IPR003439 GO:0005524
Gma20g02234 1451 PANTHER ABC TRANSPORTER B FAMILY 19 1395 - -
Gma20g02234 1451 Gene3D - 1148 1386 IPR027417 -
Gma20g02234 1451 SUPERFAMILY ABC transporter transmembrane region 63 378 IPR036640 GO:0005524|GO:0016021
Gma20g02234 1451 CDD ABC_6TM_Pgp_ABCB1_D1_like 83 378 - -
Gma20g02234 1451 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1150 1387 IPR003439 GO:0005524
Gma20g02234 1451 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 827 1119 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma20g02234 1451 MobiDBLite consensus disorder prediction 695 725 - -
Gma20g02234 1451 PANTHER ABC TRANSPORTER B FAMILY MEMBER 20-RELATED 19 1395 - -
Gma20g02234 1451 CDD ABC_6TM_Pgp_ABCB1_D2_like 822 1133 - -
Gma20g02234 1451 Pfam ABC transporter transmembrane region 832 1088 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma20g02234 1451 Pfam ABC transporter transmembrane region 84 353 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma20g02234 1451 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 394 637 IPR027417 -
Gma20g02234 1451 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 84 370 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma20g02234 1451 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 403 638 IPR003439 GO:0005524
Gma20g02234 1451 MobiDBLite consensus disorder prediction 13 38 - -
Gma20g02234 1451 Gene3D - 393 640 IPR027417 -
Gma20g02234 1451 MobiDBLite consensus disorder prediction 754 778 - -
Gma20g02234 1451 Gene3D ABC transporter type 1, transmembrane domain 806 1061 IPR036640 GO:0005524|GO:0016021
Gma20g02234 1451 SMART AAA_5 430 609 IPR003593 -
Gma20g02234 1451 SMART AAA_5 1177 1364 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g02234 Gma-Chr20 49453541 49462986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g02234 59 696 Calmodulin-binding Proteins AT2G36910 43.538 5.49e-162 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g02234 K05658 - gmx:100799399 2666.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g02721 10 54382642 54392524 Gma20g02234 20 49453541 49462986 GST