Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma20g02234 | ATGATGGGTTCGAGGGGACTGTTCGGGTGGTCCCCGCCGCACATACAGCCTCTCACGCCCGTCTCTGAGGTGTCGGAGCCGCCGGAGTCGCCGTCGCCTTACCTCGACCTCGGTGCCGAGACCTCCGCAACTCAGCCTATGGAGGTCGAGGAGGAGATGGAGGAGGCCGACGAGATTGAGCCGCCGCCCGCCGCCGTTCCTTTCTCCCGCCTCTTCGCCTGCGCTGACCACCTCGATTGGTTTCTTATGCTCGTCGGCTCCATCGCCGCCGCCGCACACGGCACTGCTCTCGTTGTTTACTTGCACTACTTCGCCAAGGTTCTCCGGGTTCCACAGCAGGGTTTGCCGGAAGAGCAGTTTCACAGGTTTAAAGAGCTTGCTTTAACCATTGTTTATATTGCTGGGGGAGTTTTTGCTGCTGGTTGGATTGAGGTTTCGTGTTGGATTCTTACTGGAGAACGGCAGACTGCTGTCATCAGATCAAAATATGTCCAAGTATTACTTAACCAAGATATGAGTTTTTTTGATACTTATGGAAATAACGGAGACATTGTGAGTCAAGTATTGAGTGATGTGCTGCTCATTCAGTCTGCTCTTAGTGAAAAGGTTGGGAATTATATTCATAATATGGCAACATTCTTCAGTGGTCTTGTTATTGCTTTTATCAATTGTTGGCAGATTGCATTGATAACATTAGCTACAGGTCCATTTATTGTTGCTGCAGGAGGAATATCAAATATATTCCTCCATAGGCTTGCCGAGAATATTCAAGATGCATATGCTGAAGCAGCCAGCATTGCTGAACAGGCAGTTTCATATATAAGGACCTTATATGCATTTACAAATGAAACATTGGCCAAATATTCATACGCAACATCACTGCAAGCTACTCTTAGATATGGTATATTAATAAGTCTCGTTCAAGGCCTTGGCCTTGGTTTTACATATGGGCTTGCAATATGTTCTTGTGCATTACAACTCTGGGTTGGAAGGCTCTTGATTATACATGGAAAAGCTCATGGTGGTGAAATTATAACAGCTCTGTTTGCTGTGATTCTAAGTGGCTTGGGATTGAATCAAGCTGCAACAAATTTCTACTCATTTGATCAAGGGCGAATAGCTGCCTATAGACTGTTTGAGATGATAAGCCGGTCATCCTCATCTTTTAATCATGATGGCAGTGCTCCAGCTTCTGTCCAAGGAAATATAGAGTTTCGGAATGTTTACTTCAGTTATCTTTCTCGCCCTGAAATCCCTATCTTGAGTGGGTTTTATCTCACTGTTCCTGCTAAAAAAACTGTGGCACTTGTTGGCAGAAATGGCTCTGGAAAAAGTAGTATTATTCCCCTCATGGAGCGGTTCTATGATCCAACTTTAGGGGAAGTTCTTTTAGATGGTGAAAACATAAAGAATATGAAACTGGAATGGCTAAGGAACCAAATAGGACTGGTCACCCAGGAACCTGCTTTGCTCAGTTTGAGTATAAGAGACAACATTGCTTATGGGCGAGATACCACCATGGATCAAATTGAAGAGGCTGCTAAAATAGCTCATGCACATACCTTTATCAGCTCATTAGATAAAGGTTATGACACACAGGTTGGCAGGGCTGGTCTAGCTTTGACAGAAGAGCAGAAAATAAAACTTTCTATTGCAAGAGCTGTGCTTTTAAATCCATCCATTCTTTTGCTTGATGAGGTTACTGGTGGACTTGATTTTGAGGCTGAGAGGTCTGTTCAGGAGGCTCTGGATCTCCTCATGTTGGGACGCTCAACAATCATAATTGCTCGAAGGCTTAGTCTTATAAAGAATGCTGATTATATAGCTGTTATGGAGGATGGTCAACTGGTTGAGATGGGTACTCATGATGAGTTACTCACCCTGGATGGCTTATACGCAGAGCTTCTTCGATGTGAAGAGGCCACAAAACTTCCTAAGAGGATGCCTGTTCGAAACTACAAGGAGACTGCAACTTTCCAAATTGAGAAAGATTCTTCAGAAAGTCATAGCTTCAAAGAACCTTCATCTCCTAAAATGATAAAGTCACCCTCTCTTCAGAGAGTTTCTGCCATATTTCGGCCTTCAGATGGCTTCTTCAACTCACAAGAATCACCAAAAATCCGGAGCCCACCTTCTGAGAAGTTGATGGAGAATGGCCAGTCTTTAGATTCATCAGATAAGGAGCCATCAATAAAAAGGCAGGATAGTTTTGAAATGAGACTACCAGAGTTACCCAAGATTGATGTTCAATGTGTGCATCGACAAACATCAAATGGTTCTGATCCAGAATCTCCCATTTCACCTCTTTTAACGTCCGACCCTAAAAATGAACGCTCCCATTCACAGACTTTTAGCAGACCTGATTGTCATTCTGATGATCTTTTGGTGAAAATGAGTGAAACAAAGGATGCAAGGCATCGAAAACAACCCTCAATTTGGAGGCTAGCAGAGCTTAGTTTTGCAGAGTGGCTTTATGCTGTGTTAGGAAGCATAGGTGCTGCTATCTTTGGTTCTTTCAATCCCCTTCTTGCTTATGTTATTGGTCTGGTGGTGACAGACTATTATAGAATTGATGAAGCTCAGCACTTACAAGGGGAGATAAACAAATGGTGCTTGATCATTGCCTGCATGGGTATTGTGACAGTTGTTGCCAACTTTTTACAGCATTTCTATTTTGGTATTATGGGGGAGAAAATGACAGAAAGAGTTAGGAGAATGATGTTCTCAGCCATGCTTCGCAATGAAACTGGATGGTTTGATGAAGAGGAAAATAGTGCTGACAATTTATCCATGCGCTTGGCCAATGATGCTACATTTGTGCGAGCAGCATTCAGTAACCGACTTTCCATATTTATTCAGGACAGTGCTGCTGTTATTGTTGCTTTTCTCATTGGTGTTTTGCTGCACTGGCGATTAGCACTTGTGGCCTTAGCAACACTTCCAGTTCTTTGTGTTTCTGCTCTTGCCCAGAAATTGTGGCTTGCTGGCTTTTCAAAGGGCATACAGGAAATGCACAGAAAGGCATCTTTGGTTCTTGAAGATGCAGTTAGGAATATTTACACTGTTGTTGCATTTTGTGCTGGTAATAAGGTGATGGAACTCTACCAGTTGCAGTTAAATAAAATATTTAAGCAAAGCTTTCTTCATGGAGTGGCCATTGGTTTTGGATTTGGCTTTTCACAGTTTCTGCTCTTTGCTTGTAATGCCCTTCTACTTTGGTACACTGCACTATGTGTAAATAAGAGTTATGTGGATCTACCTACTGCTCTCAAGGAGTACATTGTTTTCTCATTTGCTACATTTGCCCTTGTGGAGCCTTTCGGGTTGGCTCCTTACATACTTAAGCGACGTAAATCTCTCATGTCAGTGTTTGAAATTATAGATCGTGTGCCTAAGATTGATCCTGATGATAGCTCAGCACTGAAGCCACCCAATGTATATGGAAGCATTGAGTTGAAAAATATTGATTTTTGTTATCCTTCTCGACCTGAAGTGTTGGTATTAAGCAATTTTAGTCTCAAAGTCAATGGAGGACAAACAATTGCTGTAGTGGGAGTTTCGGGATCAGGGAAGAGCACAATAATATCTTTGATTGAGAGATTCTATGATCCAGTTGCCGGCCAAGTTTTGCTAGATGGGAGGGATTTAAAACAATATAATTTGAGATGGTTGAGGAGCCACCTTGGTTTGGTTCAGCAGGAACCAATTATCTTCTCAACTACCATAAGGGAAAACATCATATATGCCAGGCATAATGCCAGTGAAGCTGAAATGAAGGAGGCTGCAAGAATAGCAAATGCTCACCATTTCATTAGTAGCTTGCCTCATGGTTATGACACTCATGTTGGGATGAGAGGTGTTGACTTAACTCCAGGACAAAAACAGAGAATTGCAATTGCAAGGGTAGTGCTTAAAAATGCTCCTATTTTGTTGTTGGATGAAGCTAGTTCATCAATTGAATCTGAGTCAAGCCGAGTGGTGCAAGAGGCTCTAGACACCCTAATAATGGGAAACAAGACCACTATTTTAATAGCACACAGGGCTGCGATGATGAGGCATGTGGACAACATAGTAGTTCTAAACGGAGGAAGGATAGTGGAGGAGGGGACCCATGATTCATTGGTGGCAAAAAATGGTCTGTATGTCCGATTGATGCAACCTCATTTTGGTGGAGGCTTGCATGTAGCAAGAATGGGAGTATTGGATCAGCACTCGGCATTGGTTGGCATAAGAAGAGGGTACTGTGGCAGGGGTAGTGTAGGAATTAAAGATAGGAATTTGGAATTTGGTTGCTTTGAGACTTTAGTATTGAAGCTGAGGATGCATATTCTTTTGGAGGCAAGCAGTTTAGACTGA | 4356 | 0.4284 | MMGSRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDLGAETSATQPMEVEEEMEEADEIEPPPAAVPFSRLFACADHLDWFLMLVGSIAAAAHGTALVVYLHYFAKVLRVPQQGLPEEQFHRFKELALTIVYIAGGVFAAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIAFINCWQIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRLLIIHGKAHGGEIITALFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSSFNHDGSAPASVQGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNMKLEWLRNQIGLVTQEPALLSLSIRDNIAYGRDTTMDQIEEAAKIAHAHTFISSLDKGYDTQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERSVQEALDLLMLGRSTIIIARRLSLIKNADYIAVMEDGQLVEMGTHDELLTLDGLYAELLRCEEATKLPKRMPVRNYKETATFQIEKDSSESHSFKEPSSPKMIKSPSLQRVSAIFRPSDGFFNSQESPKIRSPPSEKLMENGQSLDSSDKEPSIKRQDSFEMRLPELPKIDVQCVHRQTSNGSDPESPISPLLTSDPKNERSHSQTFSRPDCHSDDLLVKMSETKDARHRKQPSIWRLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLVVTDYYRIDEAQHLQGEINKWCLIIACMGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNETGWFDEEENSADNLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAFLIGVLLHWRLALVALATLPVLCVSALAQKLWLAGFSKGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYQLQLNKIFKQSFLHGVAIGFGFGFSQFLLFACNALLLWYTALCVNKSYVDLPTALKEYIVFSFATFALVEPFGLAPYILKRRKSLMSVFEIIDRVPKIDPDDSSALKPPNVYGSIELKNIDFCYPSRPEVLVLSNFSLKVNGGQTIAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKQYNLRWLRSHLGLVQQEPIIFSTTIRENIIYARHNASEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLVAKNGLYVRLMQPHFGGGLHVARMGVLDQHSALVGIRRGYCGRGSVGIKDRNLEFGCFETLVLKLRMHILLEASSLD | 1451 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma20g02234 | 1451 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1139 | 1386 | IPR027417 | - | |
Gma20g02234 | 1451 | Gene3D | ABC transporter type 1, transmembrane domain | 70 | 654 | IPR036640 | GO:0005524|GO:0016021 | |
Gma20g02234 | 1451 | Gene3D | ABC transporter type 1, transmembrane domain | 1102 | 1147 | IPR036640 | GO:0005524|GO:0016021 | |
Gma20g02234 | 1451 | MobiDBLite | consensus disorder prediction | 661 | 731 | - | - | |
Gma20g02234 | 1451 | Coils | Coil | 249 | 269 | - | - | |
Gma20g02234 | 1451 | Pfam | ABC transporter | 424 | 568 | IPR003439 | GO:0005524 | |
Gma20g02234 | 1451 | MobiDBLite | consensus disorder prediction | 754 | 790 | - | - | |
Gma20g02234 | 1451 | SUPERFAMILY | ABC transporter transmembrane region | 814 | 1135 | IPR036640 | GO:0005524|GO:0016021 | |
Gma20g02234 | 1451 | Pfam | ABC transporter | 1168 | 1316 | IPR003439 | GO:0005524 | |
Gma20g02234 | 1451 | PANTHER | ABC TRANSPORTER B FAMILY | 19 | 1395 | - | - | |
Gma20g02234 | 1451 | Gene3D | - | 1148 | 1386 | IPR027417 | - | |
Gma20g02234 | 1451 | SUPERFAMILY | ABC transporter transmembrane region | 63 | 378 | IPR036640 | GO:0005524|GO:0016021 | |
Gma20g02234 | 1451 | CDD | ABC_6TM_Pgp_ABCB1_D1_like | 83 | 378 | - | - | |
Gma20g02234 | 1451 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1150 | 1387 | IPR003439 | GO:0005524 | |
Gma20g02234 | 1451 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 827 | 1119 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Gma20g02234 | 1451 | MobiDBLite | consensus disorder prediction | 695 | 725 | - | - | |
Gma20g02234 | 1451 | PANTHER | ABC TRANSPORTER B FAMILY MEMBER 20-RELATED | 19 | 1395 | - | - | |
Gma20g02234 | 1451 | CDD | ABC_6TM_Pgp_ABCB1_D2_like | 822 | 1133 | - | - | |
Gma20g02234 | 1451 | Pfam | ABC transporter transmembrane region | 832 | 1088 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Gma20g02234 | 1451 | Pfam | ABC transporter transmembrane region | 84 | 353 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Gma20g02234 | 1451 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 394 | 637 | IPR027417 | - | |
Gma20g02234 | 1451 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 84 | 370 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Gma20g02234 | 1451 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 403 | 638 | IPR003439 | GO:0005524 | |
Gma20g02234 | 1451 | MobiDBLite | consensus disorder prediction | 13 | 38 | - | - | |
Gma20g02234 | 1451 | Gene3D | - | 393 | 640 | IPR027417 | - | |
Gma20g02234 | 1451 | MobiDBLite | consensus disorder prediction | 754 | 778 | - | - | |
Gma20g02234 | 1451 | Gene3D | ABC transporter type 1, transmembrane domain | 806 | 1061 | IPR036640 | GO:0005524|GO:0016021 | |
Gma20g02234 | 1451 | SMART | AAA_5 | 430 | 609 | IPR003593 | - | |
Gma20g02234 | 1451 | SMART | AAA_5 | 1177 | 1364 | IPR003593 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma20g02234 | Gma-Chr20 | 49453541 | 49462986 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma20g02234 | 59 | 696 | Calmodulin-binding Proteins | AT2G36910 | 43.538 | 5.49e-162 | 521 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma20g02234 | K05658 | - | gmx:100799399 | 2666.72 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma10g02721 | 10 | 54382642 | 54392524 | Gma20g02234 | 20 | 49453541 | 49462986 | GST |