Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g02230 ATGGAGATCCAGAAAAAACGTTTCAAGGGAAGCTTCCTTAGCTTCTTTGACTGGAATGGCAAATCACAAAAGAAGCTGCTTTGTGACAGGCCTAACTTACCTGATGTTTCAAAGCAAGGGAAGGAAAACATGGACAGCATGCCAAAGTCACAGGACAATAGGATAAAAATGGATAACAATAGAGTAAATCCTAGCAATAATGCAAGTTGTGATATTGATTGTGCCATATCAATTAATAGTGATGAAGGGTGTGGGGCTAAAGTCCCAGGGTTAGTAGCCAGACTTATGGGTTTGGATTCATTGCCAGTTTCAACTGTCTCTGGGCTCTCCTCCTCATCCACTTCATTATATGGCTCCAACTCTCTTGGATCTTCTCATTCTCCTGACGATGATGTTCTTCACTCAATGGTTGACTGCTGTTGCCCTGTGGATCCCATAAATATGCGACTCAAGCCAGAGAAATCTTCTTGGGCTGCCATGCAATCAAGGGCTCAGAAAGTGGGAAACCCGGCCATGAAGAGATTTCAGACTGAAATGTTGCCTCCAAAGTCTGTTAAACCCATTCCAGTTACTCACAACAAACTTTTGTCTCCTATCAAGAGCCCTGGTTATACGCAACCTAAGCATGCAGCTCATGTAATGGAGGCAGCTGCCAAAATAATTGAGGCAAGTTCCCAGCCATGTAGGAGGAATAGAATGtcttcatctggatcttcatctggatcttcatctgTTCCCTTAAGAATTCTTGATCTGAAAGAGAAATTGGAAGCTGCACAATATGAATTCAAATTCATGGATATGCACACTGCTAACCCTCTGAATGGCAAACCTAGTGAGAGGAGAAACAATTTATATAAATCCTCTTCAAGTTTCAAAGGTTCAAGGGATTCAGTAAAGAACAGTTCTTGTCAGTTGGCAAGCAAAGGAAAATCTGCTTCCCTTGCAATGCCATCTAAAACCAATGCTCAGAGCCGTGATGAATTGACTTTGAATGGTAATAGGAGATATATGAGGCAGAACAAACAGAATGATGTAAAATCAAACAAGTTTCCCAGGAGCCAGAAGAAACAAATTGTAGACCGGGCCAGGGTCATGCAGCAGAGAGCTTGTACAGGCCAGAGTAGCAATGTGCTTGGGAAGAATAACCAAAAGCAGAATAGTGTAACCAACAAAGGTGGTTCAGCTTCAAAAGTGGACTCCAATAAGCCAACACAAACTTGGTCTTCAGAAAGTTCTACCGGCGCCAAGAAGACTACAAAAAAGGTTGTTGTAAATGCCAACATTGAGCCCAAAAGGTTTGGCACAAGGATCACTGATACCATAAAGGAGTTTCCTGTTTCCAAAAGGAAGGGTATTTTCCAAAAGAAAAACTATAGTAGTAGCGATGTTCACAATGAGGCAAGAGGTTCTAATAGTGCAGCTAATACTTATGAAAACAAGTCCGTAAAATGCAATATTACAACTGATAGAAGTATTGACCAGGATGCATTTAGCATGAAAGGGAGCAATGGTGTGATTTCATTTACATTTACATCTCCCTTGAGAAGAAACATGCCCGAGTTGCAGTCCTCTACTGAGCAAGTGATGGGAACAAGGAACGAAATTGAGGTCAATTCTTGTAATAGTGATAAGCTTTATCCCCAAAAGTCATCATTTTCTCCTCCCAGGTTACATGTAATAGATGGTGATGCTTTAAGTGTTCTTTTGGAGAAAAAGCTGCAAGAATTGACATCTAGAATTAACCCACCTCAGTGCTCCCTCACGACAGAAGGGTCTTCTACTGGTTTAAGATCTAGTTTGGAAGACAAATGTCAAAGTGTGTTAAGCACCACAGTAAGGGAACAAGACAGAATCTTTCGCAATAAATTGGACAGCATGCATGATAATTGTTCTTCAAGTGATATTATGATGCTTAGCATGAATCAGCAACTGCAGACATCAGAATCAATGGAAGAGCCTAGCTGTAGCAGCAACAGTGAAAGCCAAAATGGAAGTTACTTACATAGTGCATATGGCAGCACAATTTATTCTTCCATGCAAGATGAGGAGGTATCTAATTTTTCTCCAATGAATGAATCTCTGTCACTCGAAAACAAAGCAGAATGGTCTGAGCAAAGCTCTTCCATAGTGATGGGGGATAACATGGCCAGTGAGCAGTTAAGTTTAATGTCAAATTCGGCCGAATATACAAGATCAGCAAGGAACATGGAGCTTGAATATGTAAAGGATATATTCAGCAATGCAGAGTTGATGGCAGAAGAATTTGTGGTGGGTGAAACAGACAAGATCATAATGGAAAATCTCTTTGATAAGTTGGAGAATGAAGGCCTTGGGGCAGAAAACTATGAAGAGTACTCTAAGATTGAGAGGAAGATTATATTTGACACTGTGAGCGAGTGCCTTGAATTAAGATGTAAACAAGTTTTTGTTGGAAGCTGCAAAGCATGGCCTAAATGGGTGGCTTCAGTTCAGAGGAAGAAGTGTTTAGCAGAAGAGTTTTACAAGGAAATGCTGAGCTTTAGAAATATGGAAGATGGGGTAGAGGTGGATGAACTTGTCAGCAAGGACATGAGCACTGGATGGGGTAGATGGCTTGACTTTGACATTGAAGCCTGTGAGGAGGGTTCAGAACTTGAATTTGATATTGTAACATGTTTGATTAACGAATTGGTTTCTGATTTGTTGTACGTTTAA 2697 0.4027 MEIQKKRFKGSFLSFFDWNGKSQKKLLCDRPNLPDVSKQGKENMDSMPKSQDNRIKMDNNRVNPSNNASCDIDCAISINSDEGCGAKVPGLVARLMGLDSLPVSTVSGLSSSSTSLYGSNSLGSSHSPDDDVLHSMVDCCCPVDPINMRLKPEKSSWAAMQSRAQKVGNPAMKRFQTEMLPPKSVKPIPVTHNKLLSPIKSPGYTQPKHAAHVMEAAAKIIEASSQPCRRNRMSSSGSSSGSSSVPLRILDLKEKLEAAQYEFKFMDMHTANPLNGKPSERRNNLYKSSSSFKGSRDSVKNSSCQLASKGKSASLAMPSKTNAQSRDELTLNGNRRYMRQNKQNDVKSNKFPRSQKKQIVDRARVMQQRACTGQSSNVLGKNNQKQNSVTNKGGSASKVDSNKPTQTWSSESSTGAKKTTKKVVVNANIEPKRFGTRITDTIKEFPVSKRKGIFQKKNYSSSDVHNEARGSNSAANTYENKSVKCNITTDRSIDQDAFSMKGSNGVISFTFTSPLRRNMPELQSSTEQVMGTRNEIEVNSCNSDKLYPQKSSFSPPRLHVIDGDALSVLLEKKLQELTSRINPPQCSLTTEGSSTGLRSSLEDKCQSVLSTTVREQDRIFRNKLDSMHDNCSSSDIMMLSMNQQLQTSESMEEPSCSSNSESQNGSYLHSAYGSTIYSSMQDEEVSNFSPMNESLSLENKAEWSEQSSSIVMGDNMASEQLSLMSNSAEYTRSARNMELEYVKDIFSNAELMAEEFVVGETDKIIMENLFDKLENEGLGAENYEEYSKIERKIIFDTVSECLELRCKQVFVGSCKAWPKWVASVQRKKCLAEEFYKEMLSFRNMEDGVEVDELVSKDMSTGWGRWLDFDIEACEEGSELEFDIVTCLINELVSDLLYV 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g02230 898 MobiDBLite consensus disorder prediction 30 62 - -
Gma20g02230 898 MobiDBLite consensus disorder prediction 644 664 - -
Gma20g02230 898 PANTHER DUF4378 DOMAIN PROTEIN 1 898 - -
Gma20g02230 898 Pfam DUF761-associated sequence motif 80 107 IPR032795 -
Gma20g02230 898 MobiDBLite consensus disorder prediction 271 420 - -
Gma20g02230 898 MobiDBLite consensus disorder prediction 276 348 - -
Gma20g02230 898 Pfam Domain of unknown function (DUF4378) 738 890 IPR025486 -
Gma20g02230 898 MobiDBLite consensus disorder prediction 349 363 - -
Gma20g02230 898 MobiDBLite consensus disorder prediction 227 245 - -
Gma20g02230 898 MobiDBLite consensus disorder prediction 225 245 - -
Gma20g02230 898 MobiDBLite consensus disorder prediction 368 420 - -
Gma20g02230 898 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 898 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g02230 Gma-Chr20 49421961 49425891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g02230 3 896 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 30.711 4.34e-85 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g02230 - - gmx:100797988 1685.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01466 10 41751406 41755314 Gma20g02230 20 49421961 49425891 ECH
Gma20g02230 20 49421961 49425891 Gma20g02230 20 49421961 49425891 ECH
Gma10g01466 10 41751406 41755314 Gma20g02230 20 49421961 49425891 GST
Gma03g02142 03 46891768 46895980 Gma20g02230 20 49421961 49425891 PCT
Gma20g02230 20 49421961 49425891 Gma03g02142 03 46891768 46895980 PCT