Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g02223 ATGAGTACGACTGAATTATCTAATATGAAGCAACCTCCTGTTCCGCTGGCAACCCTGATTGGCCAGGAGCTACGAAATGGAAAAATTGAAAAACCTTTTGTGAAGTATGGGCAGGCTGGCTTGGCAAAGAAAGGAGAAGATTACTTTTTAATCAAGACAGATTGCCAGAGAGTTCCTGGGGATTCATCAACACTCTTTTCTGTCTTTGCGATCTTTGATGGGCACAACGGTATATCTGCTGCTATTTTTGCGAAGGAAAGCATACTAAGTAATGTTTTGAGTGCAATACCGCAAGATATGGGTAGGGATGAGTGGCTTCAAGCTCTGCCTCGTGCTCTAGTTGTTGGTTTTGTAAAAACTGACATAGAGTTTCAGAAAAAAGGGGAAACTTCTGGAACAACAGCTACATTTGTTCTGATTGATAGATGGACTGTTACTGTTGCATCTGTTGGGGATTCCCGTTGCATATTAGATACTCAAGGAGGTGTTGTTTCTCTCTTGACAGTTGATCACAGATTGGAAGAAAATGTAGAAGAGAGGGATCGCGTTACTGCCAGTGGTGGTGAAGTAGGAAGACTCAATGTATTTGGAGGCAATGAGGTAGGGCCTCTTCGCTGCTGGCCTGGTGGATTGTGCCTTTCTAGATCAATTGGTGACACGGACGTGGGAGAATTTATTGTGCCAATACCACATGTTAAGCAAGTGAAGCTTTCAAATGCTGGTGGAAGACTTATTATAGCTTCTGATGGTATTTGGGATGCTTTATCTTCTGATATGGCTGCCAAGTCATGCCGAGGTGTACCTGCAGAGCTTGCTGCAAAGCTGGTGGTTAAGGAAGCTTTAAGGTCAAGAGGTCTGAAGGATGATACAACTTGCCTCGTTGTAGATATTATTCCTTCAGATCATCCCGTGTTGCCAACAATTCCAAGAAAGACACGTAACGTGCTAACTTCCCTTCTCTTTGGAAAGAAATCTCAAAACTCTACAAACAAAGGCACCAATAAGCTTTCTGCGGTTGGTGTTGTGGAGGAATTATTTGAAGAGGGTTCTGCAATGCTTACAGAGAGGTTAGGCAAGGATTTTCCATCTAATACGAATCCTGAGATTTTCCGCTGTGCGGTTTGCCAAGCAGATCAGCCCTCTGTGGACAGTTTATCAATGAACACTGGGCCTTTTTTCCCCCCAGTATCTAAGCCATGGGAAGGTCCATTCCTCTGCACAAACTGTCAGAAGAAGAAAGATGCCATGGAAGGAAAAAGGTCTACTAGGCCCTCGGAGACAGCATAG 1287 0.4398 MSTTELSNMKQPPVPLATLIGQELRNGKIEKPFVKYGQAGLAKKGEDYFLIKTDCQRVPGDSSTLFSVFAIFDGHNGISAAIFAKESILSNVLSAIPQDMGRDEWLQALPRALVVGFVKTDIEFQKKGETSGTTATFVLIDRWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENVEERDRVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSDMAAKSCRGVPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDHPVLPTIPRKTRNVLTSLLFGKKSQNSTNKGTNKLSAVGVVEELFEEGSAMLTERLGKDFPSNTNPEIFRCAVCQADQPSVDSLSMNTGPFFPPVSKPWEGPFLCTNCQKKKDAMEGKRSTRPSETA 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g02223 428 SMART PP2C_SIG_2 50 297 IPR001932 -
Gma20g02223 428 ProSiteProfiles PPM-type phosphatase domain profile. 25 297 IPR001932 -
Gma20g02223 428 CDD PP2Cc 43 297 IPR001932 -
Gma20g02223 428 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 2 426 - -
Gma20g02223 428 Gene3D - 34 301 IPR036457 -
Gma20g02223 428 Pfam Protein phosphatase 2C 63 281 IPR001932 -
Gma20g02223 428 PANTHER ALPHABET, ISOFORM E-RELATED 2 426 - -
Gma20g02223 428 SMART PP2C_4 23 295 IPR001932 -
Gma20g02223 428 SUPERFAMILY PP2C-like 38 297 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g02223 Gma-Chr20 49364509 49367797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g02223 1 427 PP2C-type Phosphatase Gene Family AT1G09160 75.176 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g02223 - - gmx:100794630 854.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g02223 20 49364509 49367797 Gma20g02223 20 49364509 49367797 ECH