Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g02218 ATGGGGCATTTTTCATCTGCGTTCAATAGGTTGGCAAAGTCATTCACAACGAAGAAAGGAAGGAGTTCTGATGAATGTAATGGAAGAGAAGCCGCGGAAGCAATGGCAAAGGAAGCCAAAAGAAATCACTTCATGTTGCATAGCTCTGGCACAGTTAATGTTGATGGTTCAAACAACTTTGCCTCAGTTTTCTCCAGAAAAGGCCAGAAAGGAGTTAATCAGGATTGCTGCATTGTGTGGGAAGAATTTGGGTGCCAAGAGGACATGATCTTCTGCGGGATTTTTGATGGGCATGGGCCATGGGGTCACTTTGTGGCCAAAAGAGTACGAAAGTCAATGCCGCCATCTTTGCTATGCAACTGGCAGGAGACACTTTCCCAAACTCCACTTCATTCAGATGTTGATTTTGATATAGAGACAGAGAAAAAGCAACACCGGTTTAACTTGTGGAAGCATTCATACTTGAAGACTTGTGCTGCCATTGATCGCGAACTAGAGCAGAATCGCAAGATAGATTCATTTTACAGTGGAACAACTGCCTTGTCAATTGTTAGACAGGGTGAACTCATTATCATTGCAAACGTTGGTGACTCTCGTGCTGTGTTAGCTACAACATCAGATGATGGAAGTTTGGTACCAGTTCAGCTGACAATAGATTTCAAGCCCAATTTACCTCAAGAGGCAGAGCGAATACTTGAGTCCCAAGGACGAGTTTTCTGCTTAGACGACGAGCCTGGGGTGCATAGGGTGTGGTTGCCGGATGAGGAGTTTCCAGGACTTGCCATGTCAAGGGCTTTTGGTGACTACTGCGTCAAAAAGTATGGTCTTATTTCAGTGCCTGAGGTAACACACAGGAATATAACCACCAAAGACCAGTTTGTTGTGCTAGCCACTGATGGGGTGTGGGATGTAATCTCCAATCAAGAAGCAGTGGATATTGTGTCTTCAACACCAGACAGAACAGACTCGTCTAAACGTTTGGTGGAGTGTGCAATGCGTGCATGGAAACGCAAGAGGCGAGGCATTGCAATGGATGATATTTCAGCTATTTGTCTCTTCTTTCACTCTTCACCTTCACTTGACCAAGTTGCCACCCCAGAATAG 1104 0.4502 MGHFSSAFNRLAKSFTTKKGRSSDECNGREAAEAMAKEAKRNHFMLHSSGTVNVDGSNNFASVFSRKGQKGVNQDCCIVWEEFGCQEDMIFCGIFDGHGPWGHFVAKRVRKSMPPSLLCNWQETLSQTPLHSDVDFDIETEKKQHRFNLWKHSYLKTCAAIDRELEQNRKIDSFYSGTTALSIVRQGELIIIANVGDSRAVLATTSDDGSLVPVQLTIDFKPNLPQEAERILESQGRVFCLDDEPGVHRVWLPDEEFPGLAMSRAFGDYCVKKYGLISVPEVTHRNITTKDQFVVLATDGVWDVISNQEAVDIVSSTPDRTDSSKRLVECAMRAWKRKRRGIAMDDISAICLFFHSSPSLDQVATPE 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g02218 367 SMART PP2C_4 51 352 IPR001932 -
Gma20g02218 367 Gene3D - 50 356 IPR036457 -
Gma20g02218 367 Pfam Protein phosphatase 2C 84 328 IPR001932 -
Gma20g02218 367 CDD PP2Cc 59 354 IPR001932 -
Gma20g02218 367 SUPERFAMILY PP2C-like 58 356 IPR036457 -
Gma20g02218 367 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 1 363 - -
Gma20g02218 367 PANTHER ALPHABET, ISOFORM E-RELATED 1 363 - -
Gma20g02218 367 ProSiteProfiles PPM-type phosphatase domain profile. 60 354 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g02218 Gma-Chr20 49317688 49321397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g02218 1 355 PP2C-type Phosphatase Gene Family AT3G05640 70.308 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g02218 - - gmx:100793051 744.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01483 10 41942456 41944429 Gma20g02218 20 49317688 49321397 GST
Gma19g02188 19 50698028 50699904 Gma20g02218 20 49317688 49321397 PCT
Gma03g02153 03 46987672 46991487 Gma20g02218 20 49317688 49321397 PCT
Gma18g00445 18 4189975 4190298 Gma20g02218 20 49317688 49321397 PCT
Gma11g02067 11 34698415 34699746 Gma20g02218 20 49317688 49321397 PCT
Gma20g02218 20 49317688 49321397 Gma19g02188 19 50698028 50699904 PCT
Gma20g02218 20 49317688 49321397 Gma03g02153 03 46987672 46991487 PCT