Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g02217 ATGTATGGAAAGGAGACTGATTTGGGTCCCTTTTGCCGTAGATTTGAAGAGGGAGCTGAGCAGTTTCGGTTAGATGTTGCACAAAATCCAAATGATACGAAAGAGTTTATATGGTGCTTTCTGTGTGAAGCTCAACTGTTTGGAGTGGATGAAGCAAGGAAGCGATATCTTGAGGCAAACCCATGGCCGGTTATGCGAGAAGCATATAACATGTTTATAGATGGTGGGGATCCTGAAAAGCTTGTAGCTGCATTCTCTGGTAGCAGAGAAGGTGAATATTTTTATGCTTCATTATATGCTGGGCTTTATTACGAATCTGAGTTCAAGTGGCGTCTAGTGAAGAAGGCATCACAACTTCTCTATTTACAGTTCTGTTTGCGGAAACGTGCATTAATTGAAGATTTTCATGACAAGCAAGAGCAGTTAAAAGAATGGCTTCACAACTTAGGAATAGTAGATCAAACGGTAATGGTACAAGATGACGAAGAACCTGATGATGGAGCTGTGCCTTTACACCATGAAGACAGTGTTAAAAACAGATATGTTCCATCTGTTGCTGCTCTATCAATAATCCGTCCATCAATAGGAGGGCAGCAGACAATTGCAGATAGAGCCAAAGTCGCAATGCAGGGTTATTTGAATCGATTCTTGGGAAACCTGGATATTGTGAATTCTCAAGAGGTCTGCAGGTTTTTGGAAGTCTCCAGGCTATCCTTTTTACAGGAGTATGGTCCCAAACTGAAAGAGGGATATGTAATGGTGAAGCATTTGTCAAATATTTCACAGGATTCAGATGTATCATGCTTCCCATGCAATTGGTTTCACTGTTGTAATAACAGCTGGAAGAAGGTATGGTCTGTTTTGAAACCTGGGTTTTTGGCCTTCCTGGATGATCCCTTTAACAACAAACCACTGGATATAATGATTTTTGATATCCTCCCTTACTCAAATGGAGATGGAGGGACCAAAATATTTTTAGCTGATCCTGTAAAAGAACGCAACCCTTTGCGTTACACATTCAAGGTTACTAGTGGAAATAGGAGCATATTGTTGAGAACTACCAGCAGTGCTAAAGTAAAAGCTTGGGTTACTGCAATCAATGAAGCTAGTCTAAGACCTCTTGAGGGCTGGTGTTGTCCTCATCgctttggttcctttgctcccataagaggtttgactgaagatgggagccaagcccaatggtttgttgatggacaggcagcatttgaagcaattgctacttcaattcaagatgcaaagtcagagATCTTCATTACGGGTTGGTGGTTGTGCCCAGAGCTATATCTGAGACGGCCTTTTGATAGCTTTTCTACCTCTCGGTTAGATTCATTACTAGAAGAAAAGGCTAACCAAGGGGTTCAGATCTATGTGCTTCTCTACAAGGAGGTTTCTCTAGCTTTAAAAATCAACAGCTTGTACAGTATGAGAAGACTGTTCAAAATTCATGAGAATGTGAGGGTATTACGCTATCCTGATCATTTCGCTGCTCGTGTGTATTTATGGTCACACCATGAAAAACTTGTAATTATTGATTACAAGATTTGCTATATCGGAGGATTAGATTTATGCTTTGGTCGATATGACACACCTGAACATAAAGTGGGTGACTGTCCTTCTGTAATATGGCCTGGAAAGGACTATTACAACCCAAGAGAATCTGAGCCAAATTCATGGGAAGACACCATGAAAGATGAATTGGATCGCAAGAAGTATCCCCGTATGCCATGGCACGATGTCCATTGTGCTCTTTGGGGACCTCCCTGTCGTGACATTGCTCGGCACTTTGTTCAACGTTGGAACCATGCTAAGAGAACTAAAGCTCCAAATGAACATGGAATTCCGCTACTTATGCCTCACCATCACATGGTCCTCCCTCATTACATGGGAAGAAGCAAAGAGATAGACATTGATGAAAAGAAAGGCAAAGACAAGAGGAAAGGAATTGGCAGGCAGGATTCATTTTCCTCAGAGTCTCCAATGCAGGATATACCACTACTTTTGCCTCAAGAAGCTGATGGACTAGATACTTCAAATGGAGATCATACAAATTTAAGTGAAAATTTTCCATTGTTGTCCCAAAAGCTGGAGCATGAAACTTTAGTTTCAGACACCCAGATGAAAGGGTTTCAAGATGAAGTTGTTCCTTTAAACTTGGGGGCACAACCTGTTGCCAATGCTCTAGATGATTGGTGGGAAACACCAGAAGAAACCAATGATGACATTACTTTGGAATATGGAGAAGTTGGTCCACGTACTACCTGTCACTGTCAGGTAATCAGAAGTGTCAGCCAGTGGTCTGCTGGAACAAGTCAGCCTGAAGAAAGCATTCACACTGCATATTGTTCTCTTATTGAAAAAGCAAAGCATTTTATCTACATTGAGAACCAATTTTTCATATCAGGTCTAGCAGGGGATGACATAATACTCAACCGTGTTTTGGAAGCACTATACAGGCGTATTTTGCAAGCCCACAAAGATCAGAAAGATTTTAGAGTTATAATTGTGATGCCCCTCTTGCCTGGTTTCCAGGGTGGTCTGGATGATGGTGGTGCTGCTACTGTAAGAGCCTTAACACACTGGCAGTATCGAACAATTTCTAGAGAAAATCACTCCATATTAGACAATCTTGAAGCTATACTTGGTCCTAAGACACAAGATTATATTTCTTTCTATGGTCTACGATCTCATGGCAGACTTTATGAAAATGGCCCTGTGGCTACAAGTCAGGTATATGTGCACAGTAAATTGATGATAATTGATGACCGTATAGCTTTTATTGGATCATCTAATATAAATGACCGTAGTTTGCTTGGATTAAGAGACTCTGAGATTGGAGTGCTTATAGAAGACAAAGAATATGTTGACTCATTGATGAATGGAAAACCATGGAAGGCTGGGAAATTTTCCTACAGCCTCCGCTGCTCCCTATGGTCTGAGCACCTTGGTCTTCATGCCGGAGAGATCAGTAAAATCAGTGATCCGGTGGCAGATACAACCTACAAGGACTTGTGGTCAGCAACTGCAAAGGAAAATACTAGGATATACCATGAGGTCTTTGCTTGCATTCCCAACAATCAGATACACTCAAGAGCTGCACTTCGGCAAAGCATGGTTCACTGGAAAGAAAAACTTGGTCATACCACCATAGATATGGGAATAGCCCCAGATAAGTTGGTCTGTCATGAGAATGGAGAAATCAAAATAATAGACCCTATAGATAGGTTGAAGTCTGTGAAGGGACATCTTGTTTCCTTTCCCTTGGAGTTCATGCGTGAGGAAGATCTTAGACCAGCTGTTATTGAGAGCGAGTTTTATGTCGCTCCTCAAGTATATCATTAA 3360 0.3982 MYGKETDLGPFCRRFEEGAEQFRLDVAQNPNDTKEFIWCFLCEAQLFGVDEARKRYLEANPWPVMREAYNMFIDGGDPEKLVAAFSGSREGEYFYASLYAGLYYESEFKWRLVKKASQLLYLQFCLRKRALIEDFHDKQEQLKEWLHNLGIVDQTVMVQDDEEPDDGAVPLHHEDSVKNRYVPSVAALSIIRPSIGGQQTIADRAKVAMQGYLNRFLGNLDIVNSQEVCRFLEVSRLSFLQEYGPKLKEGYVMVKHLSNISQDSDVSCFPCNWFHCCNNSWKKVWSVLKPGFLAFLDDPFNNKPLDIMIFDILPYSNGDGGTKIFLADPVKERNPLRYTFKVTSGNRSILLRTTSSAKVKAWVTAINEASLRPLEGWCCPHRFGSFAPIRGLTEDGSQAQWFVDGQAAFEAIATSIQDAKSEIFITGWWLCPELYLRRPFDSFSTSRLDSLLEEKANQGVQIYVLLYKEVSLALKINSLYSMRRLFKIHENVRVLRYPDHFAARVYLWSHHEKLVIIDYKICYIGGLDLCFGRYDTPEHKVGDCPSVIWPGKDYYNPRESEPNSWEDTMKDELDRKKYPRMPWHDVHCALWGPPCRDIARHFVQRWNHAKRTKAPNEHGIPLLMPHHHMVLPHYMGRSKEIDIDEKKGKDKRKGIGRQDSFSSESPMQDIPLLLPQEADGLDTSNGDHTNLSENFPLLSQKLEHETLVSDTQMKGFQDEVVPLNLGAQPVANALDDWWETPEETNDDITLEYGEVGPRTTCHCQVIRSVSQWSAGTSQPEESIHTAYCSLIEKAKHFIYIENQFFISGLAGDDIILNRVLEALYRRILQAHKDQKDFRVIIVMPLLPGFQGGLDDGGAATVRALTHWQYRTISRENHSILDNLEAILGPKTQDYISFYGLRSHGRLYENGPVATSQVYVHSKLMIIDDRIAFIGSSNINDRSLLGLRDSEIGVLIEDKEYVDSLMNGKPWKAGKFSYSLRCSLWSEHLGLHAGEISKISDPVADTTYKDLWSATAKENTRIYHEVFACIPNNQIHSRAALRQSMVHWKEKLGHTTIDMGIAPDKLVCHENGEIKIIDPIDRLKSVKGHLVSFPLEFMREEDLRPAVIESEFYVAPQVYH 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g02217 1119 CDD PLDc_vPLD1_2_yPLD_like_1 399 544 - -
Gma20g02217 1119 SUPERFAMILY Phospholipase D/nuclease 754 965 - -
Gma20g02217 1119 PANTHER PHOSPHOLIPASE D 61 1116 IPR015679 -
Gma20g02217 1119 ProSiteProfiles PH domain profile. 245 371 IPR001849 -
Gma20g02217 1119 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 506 533 IPR001736 GO:0003824
Gma20g02217 1119 MobiDBLite consensus disorder prediction 642 669 - -
Gma20g02217 1119 PIRSF PLD_euk 92 550 IPR016555 GO:0004630|GO:0006654|GO:0048017
Gma20g02217 1119 PIRSF PLD_euk 546 647 IPR016555 GO:0004630|GO:0006654|GO:0048017
Gma20g02217 1119 PIRSF PLD_euk 626 1119 IPR016555 GO:0004630|GO:0006654|GO:0048017
Gma20g02217 1119 PANTHER PHOSPHOLIPASE D ZETA 2 61 1116 - -
Gma20g02217 1119 Gene3D Endonuclease Chain A 392 626 - -
Gma20g02217 1119 CDD PLDc_vPLD1_2_yPLD_like_2 775 959 - -
Gma20g02217 1119 CDD PH_PLD 223 369 - -
Gma20g02217 1119 Pfam PH domain 248 370 IPR001849 -
Gma20g02217 1119 Gene3D - 244 375 IPR011993 -
Gma20g02217 1119 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 915 942 IPR001736 GO:0003824
Gma20g02217 1119 SUPERFAMILY PH domain-like 277 371 - -
Gma20g02217 1119 Gene3D Endonuclease Chain A 739 978 - -
Gma20g02217 1119 SUPERFAMILY Phospholipase D/nuclease 360 626 - -
Gma20g02217 1119 SMART pld_4 915 942 IPR001736 GO:0003824
Gma20g02217 1119 SMART pld_4 506 533 IPR001736 GO:0003824
Gma20g02217 1119 SMART PH_update 246 373 IPR001849 -
Gma20g02217 1119 Pfam PLD-like domain 788 962 IPR025202 -
Gma20g02217 1119 Pfam Phospholipase D Active site motif 506 533 IPR001736 GO:0003824
Gma20g02217 1119 MobiDBLite consensus disorder prediction 642 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g02217 Gma-Chr20 49293440 49308260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g02217 107 1119 Phospholipase D Gene Family (Wang group) AT3G05630 66.732 0.0 1365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g02217 K01115 - gmx:100796914 2064.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01484 10 41964591 41964872 Gma20g02217 20 49293440 49308260 GST