Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g02215 ATGTCGGAGAATCTCGACGGTTCCGAAATCTCGCCGAGTACTTCCTCCCAAAGTCTCGGCGAGTTACCGGAAATCGCCGCGATGCCATTCGGAATCGATCTCGTGTCGGCGGCCAGGCGAAATATCTGGTTCCTGAGGACAGTGGCAGATTCTGTGTGGCTTCACCACACCCCCATTATGGTGGAAGCCGTGAGAAGGTACCATGATTTCTGGATGCCGTTGATTGCTGATCTCACGCTGCCCTACTCTTCCCCTCCCACGATTCTTCCTCCCCTTGACATCCACTGGGTTTGGTTCTGTCACACTTTAAACCCCGTAAGTTACAGGGAATACTGTGAAACGAGATTCTCGAAGCTGATTGGGAAAGCGGGAATCTTTGATGAAGAGAACAGAGACTACGCGTTGATGCGGTGCATGGAGATTTGGAGCAGTAGATACCCGTTGGAGTCGTTTGAGAACGAGGCGAGTTCGGATTCGCAGGATTTGGATACTGTGGTTGTTGTTGGGGGGTGTTTGAAGGAGAGTGTGTTTAAGGAAGTTGAAAAGCAGAGGGTGTTGCTGTGTTCCATGTTTGTAGAGCCGTACAGGTCCGAGGTGGTCTACTTGATAGCTGCGAGACAGCGATACAAGGCTTTCTTGTTTATGCTGCTGAGGTTCGCGCGTGACTTCTCTTCGCGTTTGGTTCCTACTTCGGACATCCTCTTAATGTGGTTGACCCACCAGagctacccaacagtgtattgtgaagaTTTGAAAGCATTAGCTATAGAAGGTGATCTGGAGAAGGTGGCAACTCTGTCTGAAAAGGTGAAGGAAAAGGAGTTTGAAGAAACCAAGAAGTTGTGGGATAGGGCGTTCAATCAACCTTATGAGAAAGCTGGTGGAGAGGTGCCTTTGACGTTGGAGGGTGTTATCTCAATCAAATCCCCTGTCTATTGGGAGGATTCGGGCACCGATGTAAATACAAAATACAGGTCCATGCTTCCAAGATTTTTACTGGAGGCCTGTGTGTTTGTGAGGCTTAAGCAAAGAATAACAACATCGCAGAAGGATGTAAACCGTGATTTTCTACGTCTCCAAATAATTAGGTGTCATAGTGAACTAAAGTTAGATAAAGCCTTCTCCAATTTCACCAATGATTCGTGGAAAAAAGCTTGGCACTTTTACTGTGAGTTTGGGACTAAGGGAGTTATGTTTGACTATCGTCGTCATGGTGGTAACTGTCTAAGAGGAAGTAGCCTGCTAGATACTGTGTCGTTCCGCTGGAATGATTTATTGAGAGCAGATTCTTTAACTTTGGAAAAGGAAGTTAGTCAACAGGTTAATGTTGTTACGTCAATAACCCCACCAGTTCAAGCACCATACTTGTTGAAATGTGTGCCTGATCGAGTCACTGATGATTCTGGGGCTATGATATCTGATGTGATTCTGAAGATGAATAGTTATCGTCCACAAGAAGGCCGATGGTTGTCTCGCACAGTTCTTGATCATGCAGGGAGAGTGTGTTTTGTTATTAGAATTAGGGTAGGAGGAGGATTTTGGAGAAGAGGGGGTGAAGCTCCTTCAGCTGTAAAATGGGAAGATAGGATTATAGAGATACGCGAAGGATCTTGGTCTTATGTTGCCGGTTACATTGGTAGAGCCCCTGAAAAGGTGGTGGCCACTGCAACACCAAAGGAACCTACTGAACAATGTAAAGCTGCATGGTGCTTTTCAACAGGAGATGAACTGACAATACAATGGGACTCATCACAATCAGTGTCAGGTCTCACCTTTAGCTTGCTAAATCAAACATCTCCAGAGTCATCGGTAGTACTGCTATTGAGAGGGAGGCAGATGCAATATCAAGTAAAGAAAACAAAGTCAAAGAGAAAAGGTGAAGACATGAAAACCGAGTTAGAGGAGAAAGAGGTTGACGAAGAGGAAGACGAGGAGAGTTTTATAACAGTAGTACGTTTCACAGAAGATAACCCAGATGGAAAAGCAACTGCTCTTCTAAATTGGAGGCTATTGGTTGTTGAAGTATTGCCAGAAGAAGATGCAGTACTGATGCTTCTTCTTTGCCTTTCAATACTCAAAAGCGTATCAGAAATGAAGAAACAAGACGTGGGAGGGTTGTTGGTGAGGAGAAGATTAAAAGAAGCAAGGCTTGGAAGTAGGGATTGGGGTTCTGTGATACTTCATCCATCTTCATGGTCCTCGTCCATTGATTCAACTTATCTTCAACCTTGGCATTGGAATGCTGGGGTTTTGATGAAATCTGATGCAGTAGATCAGCTTAAAAGGTATCCAACATTAAGTCAATCGCCAGTGGAAGTGGATTTCATATTTGGCAATGCAGCGGCAGTACTCCAGGATTGTAACATGTATCCAAGACTTCCTATGCAAAACCAATTCAATGCAATCACAGCACAAGGCCGAACCGATCCAAACCAAAACACCGGCGTCTCCATACAAAACTGTTGCACAATAGCAGCCAGTGACTTGGGTGATGCTACTAACAATTATAATGGGTGGAGCGAATGGTCAGGGGATTTTGCTTTGAGCACGCTGTATTATGCAGAGTTTGCTAACTGGGGACCTGGTTCTAACACTAGCAATAGGGTAACATGGGAAGGGTACCATCTCATTGATGAAAAGGATGCAGATGATTTCACGGTGCACAAGTTTATTCAAGGTGACAAATGGCTGCCCCAGACAGGAGTGCCTTTCAAAGCTGGGTTTCAGTGA 2730 0.4473 MSENLDGSEISPSTSSQSLGELPEIAAMPFGIDLVSAARRNIWFLRTVADSVWLHHTPIMVEAVRRYHDFWMPLIADLTLPYSSPPTILPPLDIHWVWFCHTLNPVSYREYCETRFSKLIGKAGIFDEENRDYALMRCMEIWSSRYPLESFENEASSDSQDLDTVVVVGGCLKESVFKEVEKQRVLLCSMFVEPYRSEVVYLIAARQRYKAFLFMLLRFARDFSSRLVPTSDILLMWLTHQSYPTVYCEDLKALAIEGDLEKVATLSEKVKEKEFEETKKLWDRAFNQPYEKAGGEVPLTLEGVISIKSPVYWEDSGTDVNTKYRSMLPRFLLEACVFVRLKQRITTSQKDVNRDFLRLQIIRCHSELKLDKAFSNFTNDSWKKAWHFYCEFGTKGVMFDYRRHGGNCLRGSSLLDTVSFRWNDLLRADSLTLEKEVSQQVNVVTSITPPVQAPYLLKCVPDRVTDDSGAMISDVILKMNSYRPQEGRWLSRTVLDHAGRVCFVIRIRVGGGFWRRGGEAPSAVKWEDRIIEIREGSWSYVAGYIGRAPEKVVATATPKEPTEQCKAAWCFSTGDELTIQWDSSQSVSGLTFSLLNQTSPESSVVLLLRGRQMQYQVKKTKSKRKGEDMKTELEEKEVDEEEDEESFITVVRFTEDNPDGKATALLNWRLLVVEVLPEEDAVLMLLLCLSILKSVSEMKKQDVGGLLVRRRLKEARLGSRDWGSVILHPSSWSSSIDSTYLQPWHWNAGVLMKSDAVDQLKRYPTLSQSPVEVDFIFGNAAAVLQDCNMYPRLPMQNQFNAITAQGRTDPNQNTGVSIQNCCTIAASDLGDATNNYNGWSEWSGDFALSTLYYAEFANWGPGSNTSNRVTWEGYHLIDEKDADDFTVHKFIQGDKWLPQTGVPFKAGFQ 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g02215 909 PANTHER ENOLASE (DUF1399) 18 758 IPR009836 -
Gma20g02215 909 Pfam Pectinesterase 772 831 IPR000070 GO:0030599|GO:0042545
Gma20g02215 909 Pfam Pectinesterase 836 894 IPR000070 GO:0030599|GO:0042545
Gma20g02215 909 PANTHER ENOLASE (DUF1399) 18 758 - -
Gma20g02215 909 SUPERFAMILY Pectin lyase-like 773 906 IPR011050 -
Gma20g02215 909 Pfam Glycine-rich domain-containing protein-like 30 109 IPR009836 -
Gma20g02215 909 Pfam Glycine-rich domain-containing protein-like 107 250 IPR009836 -
Gma20g02215 909 Gene3D - 770 908 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g02215 Gma-Chr20 49274844 49284765 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g02215 773 908 Carbohydrate Esterase AT4G02330 54.545 9.00e-52 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g02215 - - gmx:100795865 1519.6