Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g02214 ATGgggatcgaTCTCAAGGCCGGAGGTAAGAGCAAAAAGACCAAAAGAACAGCACCCAAGTCCAATGATATCTATCTCAAGCTCTTGGTCAAGCTTTATCGCTTCCTTGTTCGGAGAACTGGCAGCAACTTCAATGCTGTTATACTTAAGAGATTGTTCATGAGCAAGGTTAACAAACCCCCATTGTCTTTGTCAAGGTTGATTAAGTATACGAAGGGGAAGGAAGATAAGATTGCAGTGGTGGTGGGGTCTATAACCGATGATATTCGTGTTTATGAAGTTCCACCATTGAAAGTTACAGCACTCAGGTTTACAGAGACTGCCCGTGCAAGAATTGAGAAGGCAGGCGGTGAATGCTTGACATTTGATCAGTTGGCTCTCAGGGCTCCTCTGGGACAGAACACGGTCCTTCTTAGAGGCCCAAAGAATGCTCGCGAAGCTGTGAAGCACTTTGGTCCTGCTCCTGGTGTCCCTCACAGCCACACCAAGCCTTATGTTCGAGCAAAGGGAAGGAAGTTTGAAAGGGCTAGAGGAAGGAGGAACAGCCGAGGATTTAGGGTTTGA 564 0.4628 MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIKYTKGKEDKIAVVVGSITDDIRVYEVPPLKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRAKGRKFERARGRRNSRGFRV 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g02214 187 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 1 186 - -
Gma20g02214 187 Gene3D - 1 187 - -
Gma20g02214 187 SUPERFAMILY Ribosomal proteins L15p and L18e 20 139 IPR036227 -
Gma20g02214 187 Pfam Ribosomal protein 60S L18 and 50S L18e 2 187 IPR021131 -
Gma20g02214 187 PANTHER 60S RIBOSOMAL PROTEIN L18 1 186 IPR000039 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g02214 Gma-Chr20 49253907 49256065 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g02214 3 187 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 77.957 5.68e-103 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g02214 K02883 - gmx:100791657 345.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g02214 20 49253907 49256065 Gma20g02214 20 49253907 49256065 ECH
Gma10g01489 10 41997661 41999703 Gma20g02214 20 49253907 49256065 GST
Gma19g02198 19 50802765 50804739 Gma20g02214 20 49253907 49256065 PCT
Gma03g02158 03 47058261 47060476 Gma20g02214 20 49253907 49256065 PCT