Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g02192 ATGGCACCAACAAGGAAATCTAGAAGTGTGAATAAACGGATGTCAAGTTCAAATGACAATTCCCCTGAGAAAGATGGAATTAATTCAAATAAAAACAAGCTGCGGAAGAAAAAGTTGACCGATAAATTGGGATCTCAGTGGAGCAAGGAGGAACTAGAGCGATTTTATGAAGCATATAGGAAGTATGGGAAAGATTGGAAGAAGGTGGCTGCTTTTATACGTAATAGATCTACTGAAATGGTAGAAGCTCTTTACAATATGAATCGGGCATACCTCTCTCTGCCAGAGGGGACAGCTTCTGTTGTTGGCCTCATAGCGATGATGACAGATCACTACAATGTGATGGAAGGGAGTGATAGTGAAAGGGAGAGCAATGATGCACCAGGATCTCAAAAACCTGTAAAACGAAAGCATGAAGAAGTTCAGCTTAGTGTCTCTAAAGATCAGTCTCATTCAATTGCTTCTAGAGATGATTGCCTCTCTATATTGAAGAAGAGACGCTTTGATGGTATGCAGCTCAAGCCTTATGCTGTTGGTAAAAGGACTCCTCGCGTCCCGGTTTATAAGAAAGACGATACAGAAAATTATGTTTCACCTTATAGAAGAAGCCTGAAGTCGACTATTGATGCTAATGATGATGAAGTTGCTCATGTTGTAGCTTTGGCATTAACTGAGGCTGCACACAGAGGAGGCTCTCCACAAGTTTCTCAAACACCATCTAGAAGAGTAGAGCAAAAATCCTCTCCCATCCAGAGCTTGGAAAGAAAGCACCAAATGTCAGAGACAGCTTGTGCCAAGTTTCATGATGTTTCTGTGGATGAAGAGGTTTTAGAAAGTAGTATAGAAAGCAGGGGAGCTGAAAATGGAGAATATGCAAGAGATAATAGTTCATTGATGGATACAGAAGGCATAAGCACTGTTAAAGTTTTTCAGAAGAGGAAAAAATTTTATAGAAAGAGAGAGAGAGTGGAAAATGTGGGAAATCATCAACTTGATGATGGTGGGGAAGCATGTAGCGGCACTGAAGAAGGACTTAGTTTTAGTTCACTGAAGGAAAAGGTTGATATTGATGTTACTAATGAAAAACTTGAAAAATTCTCTCCAAAAAGTCAGAGGAAAAGAAACAAGAAACTCTTCTTTGGAGATGAAACCCCTGCCTTGAATGCGTTGCAAACTTTGGCTGATCTGTCTCTAATGATGCCAATATCTACAATGGAATCTGAATCATCTATCCAGTTTAAGGGCGAAAGAATGGTTGCTGATAAGAATAATAAGTCTGCTTTACTTGAAGCAACATCAACAAACCATAAGAGACATCAACTTAAACACAGTGCGGTCCCTGAAATTGAGGTTTCAACCTCCAAAAAGTCTAAGATTGGAAAGGAATCGACAAAGGATACTAATGTTCTCTCTGAATCAAAAGGGAAACTTCCATTTGCTGATACAACATGGAAAAAAAAGCGGAAGTCTATGGGTTCAAAGGTTGCAAATGCAAAGCTTGATTCTTATCCAAGTGGTCCCTTGAAAGATGAGGCCTTAGATGACGATAACAAACCAGTGGTTAAAGGAAAACACACTGACCAGGCTTTTACCCTACCAAAGCAATTGAAGACAGTTAAATCATCAGAGAGTTCCTTTTGCAGTGATCAGAAAGATTTGACAGTATCAACTGCAGAAGTTCCACTTTTGAATGAAGTTAGTTTACCAACTAAACGAAGTAGACGAAAGATGATTTTACAGAGAACTTCCTTGCCTAAGGAAAAGTCTTCTGATTACATATTGAAAAGTCAACCTAATAAGTACTCTACCCTTAAGGCAAAGGTTTCTAGTTGCTTGGCATCTAATATGGTTCGCAGATGGTTTATTTTTGAATGGTTTTACAGTGCAATTGATTATCCATGGTTTGCCAAAAGGGAATTCATGGAGTACTTAAATCATGTTGGACTAGGGAATATCCCAAGGTTAACTCGTGTCGAGTGGAGTGTCATAAAAAGTTCCCTTGGCAAACCCCGCAGGTTTTCTGAACACTTTCTATGTGAAGAAAGGCATAAACTTGAACAGTATCGGGAATCAGTGAGGAAACATTACACTGAACTGCGGACTGGTATTAGGGATGGACTTCCAACTGATTTAGCCAAACCATTATATGTTGGACAACGTGTAATTGCTCTTCATCCAAAAACAAGAGAGATTCATGATGGTAGTGTGCTTACCGTTGACTATGACAAGTGCAGGATTCAGTTTGACCGTCCTGAATTAGGTGTTGAATTTGTAATGGACATTGATTGCATGCCTTTGAATCCATCAGATAATATGCCAGAAGCTCTGAGGAGGCATATTGGTTCCCAAAAAGCCTCTTTCATGAATAAAGAACCACAAATTAATGGAAATTCAAATTTTGGGGGCTGCGAAATGCATTCCTTTCCCGTGAAGGCAAAGGTTGCTACCGTTGATAACCTCTGTGCACAAGCTGGTTGTGCTCAACCATGTAAAGTAACACACCATCAAGCTAAGGAAGCTGACATACATGCAGTTTCTGAATTAAAGCGTGCTCTAGATAAAAAGGAGACATTGTTGATGGAGCTTCGAAGTGCAAATAGCGACATATTGGAAAACCAAAATGGCATAGAATGCTTAAAAGATTCCGAGGTTTTCAAGAAGCATTATGCCACGGTTTCTGATGCTATGCTACAACTGAGGCAACGCAATACTTACAGAGGAAACTCTCTGCCACCCTGGATGAAGCCACAAGCAAGTTTCAATGTTCACGATGATCTTCCTGGTATGTTGGATAGTTCTCTAACACAAGAGTTAGGGTCAACTGTTGTTCAAGTTATTAAAGGATCCAGGCTAAGGGCACATGCAATGGTAGATGCTGCATTTGAGGCATTGTCTTTGACAAAGGAAGGTGAAGATGCCTTCATAAAGATTGGGCAAGCATTGGATTCTATAAATCATCAGCAGTTAGCCTCCAAGTCTAGGTTACCTGTGATCAGGTCTCAAGAGCAAGTGAATGTGAATGGCAGTTTTTATCATCTTAGTCATTCAACTAGCGGTGTATCAGAACCTATACTCAATGATCCATCAGTTCCAAAACCACATAATTATTCTGACAAATTTGATACTGAACTTCCATCAGATCTTATCGCTTCATGTGTTGCCACATTAATCATGATTCAGACTTGTACTGAACGGCAATACCCTCCAGCTGATGTGGCTCAGATATTAGATTCCGCCGTTACTAGTCTGCATCCATGCTGTCCTCAAAACCTTCCTATTTACAGAGAAATTCAAATGTGCATGGGAAGAATCAAAACCCAGATGTTAGCTCTCATCCCTACTTGA 3345 0.3997 MAPTRKSRSVNKRMSSSNDNSPEKDGINSNKNKLRKKKLTDKLGSQWSKEELERFYEAYRKYGKDWKKVAAFIRNRSTEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVMEGSDSERESNDAPGSQKPVKRKHEEVQLSVSKDQSHSIASRDDCLSILKKRRFDGMQLKPYAVGKRTPRVPVYKKDDTENYVSPYRRSLKSTIDANDDEVAHVVALALTEAAHRGGSPQVSQTPSRRVEQKSSPIQSLERKHQMSETACAKFHDVSVDEEVLESSIESRGAENGEYARDNSSLMDTEGISTVKVFQKRKKFYRKRERVENVGNHQLDDGGEACSGTEEGLSFSSLKEKVDIDVTNEKLEKFSPKSQRKRNKKLFFGDETPALNALQTLADLSLMMPISTMESESSIQFKGERMVADKNNKSALLEATSTNHKRHQLKHSAVPEIEVSTSKKSKIGKESTKDTNVLSESKGKLPFADTTWKKKRKSMGSKVANAKLDSYPSGPLKDEALDDDNKPVVKGKHTDQAFTLPKQLKTVKSSESSFCSDQKDLTVSTAEVPLLNEVSLPTKRSRRKMILQRTSLPKEKSSDYILKSQPNKYSTLKAKVSSCLASNMVRRWFIFEWFYSAIDYPWFAKREFMEYLNHVGLGNIPRLTRVEWSVIKSSLGKPRRFSEHFLCEERHKLEQYRESVRKHYTELRTGIRDGLPTDLAKPLYVGQRVIALHPKTREIHDGSVLTVDYDKCRIQFDRPELGVEFVMDIDCMPLNPSDNMPEALRRHIGSQKASFMNKEPQINGNSNFGGCEMHSFPVKAKVATVDNLCAQAGCAQPCKVTHHQAKEADIHAVSELKRALDKKETLLMELRSANSDILENQNGIECLKDSEVFKKHYATVSDAMLQLRQRNTYRGNSLPPWMKPQASFNVHDDLPGMLDSSLTQELGSTVVQVIKGSRLRAHAMVDAAFEALSLTKEGEDAFIKIGQALDSINHQQLASKSRLPVIRSQEQVNVNGSFYHLSHSTSGVSEPILNDPSVPKPHNYSDKFDTELPSDLIASCVATLIMIQTCTERQYPPADVAQILDSAVTSLHPCCPQNLPIYREIQMCMGRIKTQMLALIPT 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g02192 1114 MobiDBLite consensus disorder prediction 1 40 - -
Gma20g02192 1114 Pfam DIRP 625 726 IPR033471 -
Gma20g02192 1114 SMART sant 43 91 IPR001005 -
Gma20g02192 1114 MobiDBLite consensus disorder prediction 1 25 - -
Gma20g02192 1114 Gene3D - 3 99 - -
Gma20g02192 1114 MobiDBLite consensus disorder prediction 117 152 - -
Gma20g02192 1114 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 41 81 IPR017930 -
Gma20g02192 1114 SMART DIRP_2 626 727 IPR033471 -
Gma20g02192 1114 SUPERFAMILY Homeodomain-like 41 90 IPR009057 -
Gma20g02192 1114 Coils Coil 845 868 - -
Gma20g02192 1114 ProSiteProfiles SANT domain profile. 42 79 IPR017884 -
Gma20g02192 1114 CDD SANT 47 81 IPR001005 -
Gma20g02192 1114 ProSiteProfiles Myb-like domain profile. 45 86 IPR001005 -
Gma20g02192 1114 PANTHER LIN-9 1 1114 IPR010561 GO:0006351|GO:0017053
Gma20g02192 1114 MobiDBLite consensus disorder prediction 26 40 - -
Gma20g02192 1114 Pfam Myb-like DNA-binding domain 45 82 IPR001005 -
Gma20g02192 1114 PANTHER PROTEIN ALWAYS EARLY 1-RELATED 1 1114 IPR028306 -
Gma20g02192 1114 MobiDBLite consensus disorder prediction 230 257 - -
Gma20g02192 1114 MobiDBLite consensus disorder prediction 227 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g02192 Gma-Chr20 49013045 49028586 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma20g02192 DIRP 1.6e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g02192 - - gmx:100789533 2182.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g02192 20 49013045 49028586 Gma20g02192 20 49013045 49028586 ECH
Gma10g01514 10 42279734 42293356 Gma20g02192 20 49013045 49028586 GST