Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g02167 ATGGGTTTGCCATTCGAGTCCCACCAGAGTTTAAGGATATCATGGAACCTGAGGATTTCGATGCTGGACAGTCTCTTTATGGGGACAAGGCAAAGACAGACTTTTTCAGCACGGTTTGCATCTTCCGATGGATCAGAGATTCTAAGTGTTGTTACTCGGCCAGCCAATCAACTTAAAATCACCTTCTTACAGGCTCAGAATATAACTGATTTAGGTTCTCTGAAGGAAGCAGCAAAAATTTTTGTTCCAGGAGGCTCAAAAATTTATTCTGCAAGATCAATAAAAATAAAGGAAGATGAGGGTTTTACGACTTACTATTTCTATGAATTTGGTAGAGATAACCAACACGTAGCATTGATGACAGGCATCAGCAGTGGAAAGGCTTTTATTGCTGGAGCAACTGCACCACAGTCCAAGTGGGACAGTGATGGTGTAAAACTTCGTTCTGCTGCAATATCATTAAAACTTCTACTTGTTCTTTCTTTACTTGCTTCCCCCAATCACTTTCAATGCCGGTTCCAAGTCAAGAAGAAACAGTTCTTCAAGAATTTCACAACTATACTGCTCTTTGGAGTCGTTGGAACAGTTGTTTCATTCTGTCTGATATCTGTTGGTGCCCTTCTGCTTATTCAGAGGATTGGCATATCTAACCTTGACATAAAAGATTACCTAGCAATCGGTGTCATATTGTCAGCAACGGACTCAGTTTGTACACTGCAGGTGCAAGTATACAAATATGTATTTCAAATTTACTATACCAGAGAATAG 768 0.3997 MGLPFESHQSLRISWNLRISMLDSLFMGTRQRQTFSARFASSDGSEILSVVTRPANQLKITFLQAQNITDLGSLKEAAKIFVPGGSKIYSARSIKIKEDEGFTTYYFYEFGRDNQHVALMTGISSGKAFIAGATAPQSKWDSDGVKLRSAAISLKLLLVLSLLASPNHFQCRFQVKKKQFFKNFTTILLFGVVGTVVSFCLISVGALLLIQRIGISNLDIKDYLAIGVILSATDSVCTLQVQVYKYVFQIYYTRE 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g02167 255 Pfam Sodium/hydrogen exchanger family 173 241 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gma20g02167 255 SUPERFAMILY Mog1p/PsbP-like 43 156 IPR016123 -
Gma20g02167 255 PRINTS Na+/H+ exchanger signature 227 237 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Gma20g02167 255 PRINTS Na+/H+ exchanger signature 187 195 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Gma20g02167 255 PRINTS Na+/H+ exchanger signature 172 186 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Gma20g02167 255 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 28 156 - -
Gma20g02167 255 PANTHER KETOSE/ALDOSE ISOMERASE, PUTATIVE (MOG1/PSBP/DUF1795-LIKE PHOTOSYSTEM II REACTION CENTER PSBP FAMILY PROTEIN)-RELATED 23 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g02167 Gma-Chr20 48822247 48827702 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g02167 163 241 Antiporters AT3G06370 62.025 8.60e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g02167 - - gmx:100812488 232.646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g02167 20 48822247 48827702 Gma20g02167 20 48822247 48827702 ECH