Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g02154 ATGGAATGCAACAAGGACGAGGCTTTGAGGGCTAGGCAAATTGCTGAAGCCAGAATGCAAAGAGGTGAATTTGCGGAGGCACTCAGGTTTGCTACCAAGGCCAAAAGACTGTATGCCGACGTTGAAAACATTGCCCAGATTATTACGGTTTGTGAGGTTCACATCGCTGCTCAGAAAAAACTCTCTGGCTGTGACATGGACTGGTATGCAATTCTTCAGATTGAAAGGCTGGCTGATGAAGCAACCGTAAAGAAACAGTACAGGAGGCTTGCACTGCTACTTCATCCTGATAAGAACAAGTTTGCTGGTGCAGAAGCTGCTTTCAAGTTGATTGGGCAAGCCAATGGGCTCTTGTGTGACCAAGCAAAACGTTCTTTGTTTGACAAGAAGTTTGGAGCCTCCGTGAAAGGTGCTGCGCCTAAGCCTAAGACCTCGCACAATTATTCAAATGGGAATGTGTTTGCCGCTAAACATAATGCAAATGCAACAAAGACTCAGAAGAGTTCTGATTCGCACCATTTCTCAAATGGGAATGTGTTTGCTGCAAAATGTGGCGCAAACGCAACAAATTATCAGAATTCTTATCCGAACTCCACTGGTTTCAGCAACCAAGGTGCACAGATGACATTCTGGACATCTTGCCAACATTGTGATGCTAAGTACCAGTACCCGATCCGATTTGTAAATGCAAACTTACTGTGTCAACAGTGTAAGAAGCCATTTAAAGCTCTTGCTAATGGTTTTGGAATCATGGGTGCGGCAACAGTGCTTACTTCAGTAAATATTCCGAAGGAGGCTCCAATGCATGGTCCCCCAAAACCAGCCTCAGAAAATACTGGTCGAAAACCCCTTGGTAGAGAACAAGCTGGTACGTTTGTGCGGTCAAATCCTACATCTATGAAAAAATGTGCTGCTGGAGTCGGTAGACGTTGTGGAGGTGAAAAGAGTAAAGATGGCAACATTCCTGCATCCAGTGATATGGAGCCACAGACCTCTCAAAATTTTGGAAGTAAAAGAGTAAGGCAGTCAGCACCAGATTCAGGAGAAAGTTTCAAAGCCAGAAATGGTGATGATACCAAAGCTGCCAATATTCGAGAAAATGCTGTTGATTCTTCAAATACAAGGAGATCTTCCAGGAAAAAGCAGCATGTTTCATATATTGAAACCTCTGAAGATGACGATTTTGAGATTCCTTCCAAAAAGCCACGACAAAGTGGACCACTTAATGCTGATGAAGCTGAGGAACAAAACGTGCCTGCAAGTGGTGAGTCGTCTGATAATAATATTCCAGCTACTCCCGGTGCGACTGATCAGAACAAAGAGAAGGTATCCGAGTCAGATATTGGTCTTGGAACGTCAAAGGAGGATAAGCGCTCCCCAAAAAATTCAAAGGTTCCTTCTCGTCCACGGATATTTCATTGTCCTGTTTCTGATACAGATTTCAATGATTTTGAGAAGGATAAGGAGGAGGATTGTTTTGCTGTTAATCAGTTGTGGGCAGTTTATGATAGCACTGATGCGATGCCAAGATTTTATGGTCTTGTCAAGAAAGTGGCCTCCCCTTTCCAGTTGAAGATTACTTGGTTGGAACCTGACCCAGATGACAAAGGTGAAATTGATTGGAATGATGCAGAATTGCCTATTGCTTGCGGTAAGTTTAGACTTGGTGGTTCTCAGCAAACTACAGATCGCTCCATGTTCTCTCATCAGGTGCGGTGCATAAAAGAAACCGGCAGAGGTTCTTATCTGGTATGTCCTAATAAGGGAGAAACATGGGCAATTTTCAGAGATTGGGATATCAACTGGAGTTCGAATCCAAAAAATCATCTGAAGTATGACTTCGAATATGTGGAAATCCTATCAGATTTTTCTGAGAATGTTGGCATCGCAGTTGCTTATATGGGCAAAGTGAAAGGATTTGTTAGCCTTTTTCAGAGAACGGAGAAGAATGGAGTAAACATATTTTATATCGAACCTAATGAACTATACAGGTTCTCACATCGAATTCCTTCTTATAAGATGACCGGTTATGAAAGGGAGGGTGTTCCAAGAGGATCATTTGAATTTGATCCAGCGGCCCTGCCGACTCATCTCTTTGAAGTTGGTGATTCTGGTAATGTAAAGATGTGA 2130 0.4296 MECNKDEALRARQIAEARMQRGEFAEALRFATKAKRLYADVENIAQIITVCEVHIAAQKKLSGCDMDWYAILQIERLADEATVKKQYRRLALLLHPDKNKFAGAEAAFKLIGQANGLLCDQAKRSLFDKKFGASVKGAAPKPKTSHNYSNGNVFAAKHNANATKTQKSSDSHHFSNGNVFAAKCGANATNYQNSYPNSTGFSNQGAQMTFWTSCQHCDAKYQYPIRFVNANLLCQQCKKPFKALANGFGIMGAATVLTSVNIPKEAPMHGPPKPASENTGRKPLGREQAGTFVRSNPTSMKKCAAGVGRRCGGEKSKDGNIPASSDMEPQTSQNFGSKRVRQSAPDSGESFKARNGDDTKAANIRENAVDSSNTRRSSRKKQHVSYIETSEDDDFEIPSKKPRQSGPLNADEAEEQNVPASGESSDNNIPATPGATDQNKEKVSESDIGLGTSKEDKRSPKNSKVPSRPRIFHCPVSDTDFNDFEKDKEEDCFAVNQLWAVYDSTDAMPRFYGLVKKVASPFQLKITWLEPDPDDKGEIDWNDAELPIACGKFRLGGSQQTTDRSMFSHQVRCIKETGRGSYLVCPNKGETWAIFRDWDINWSSNPKNHLKYDFEYVEILSDFSENVGIAVAYMGKVKGFVSLFQRTEKNGVNIFYIEPNELYRFSHRIPSYKMTGYEREGVPRGSFEFDPAALPTHLFEVGDSGNVKM 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g02154 709 MobiDBLite consensus disorder prediction 418 439 - -
Gma20g02154 709 SUPERFAMILY Chaperone J-domain 64 131 IPR036869 -
Gma20g02154 709 Gene3D DnaJ domain 64 188 IPR036869 -
Gma20g02154 709 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Gma20g02154 709 MobiDBLite consensus disorder prediction 265 468 - -
Gma20g02154 709 Pfam Domain of unknown function (DUF3444) 476 677 IPR024593 -
Gma20g02154 709 MobiDBLite consensus disorder prediction 440 463 - -
Gma20g02154 709 CDD DnaJ 67 120 IPR001623 -
Gma20g02154 709 PRINTS DnaJ domain signature 69 87 IPR001623 -
Gma20g02154 709 PRINTS DnaJ domain signature 87 102 IPR001623 -
Gma20g02154 709 PRINTS DnaJ domain signature 103 123 IPR001623 -
Gma20g02154 709 MobiDBLite consensus disorder prediction 323 344 - -
Gma20g02154 709 MobiDBLite consensus disorder prediction 372 400 - -
Gma20g02154 709 Pfam DnaJ domain 67 128 IPR001623 -
Gma20g02154 709 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 707 - -
Gma20g02154 709 PANTHER - 1 707 - -
Gma20g02154 709 SMART dnaj_3 66 123 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g02154 Gma-Chr20 48753507 48755636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g02154 47 244 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 27.094 2.35e-19 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g02154 - - gmx:102662460 1436.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01557 10 42625000 42625956 Gma20g02154 20 48753507 48755636 GST