LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma20g02154	ATGGAATGCAACAAGGACGAGGCTTTGAGGGCTAGGCAAATTGCTGAAGCCAGAATGCAAAGAGGTGAATTTGCGGAGGCACTCAGGTTTGCTACCAAGGCCAAAAGACTGTATGCCGACGTTGAAAACATTGCCCAGATTATTACGGTTTGTGAGGTTCACATCGCTGCTCAGAAAAAACTCTCTGGCTGTGACATGGACTGGTATGCAATTCTTCAGATTGAAAGGCTGGCTGATGAAGCAACCGTAAAGAAACAGTACAGGAGGCTTGCACTGCTACTTCATCCTGATAAGAACAAGTTTGCTGGTGCAGAAGCTGCTTTCAAGTTGATTGGGCAAGCCAATGGGCTCTTGTGTGACCAAGCAAAACGTTCTTTGTTTGACAAGAAGTTTGGAGCCTCCGTGAAAGGTGCTGCGCCTAAGCCTAAGACCTCGCACAATTATTCAAATGGGAATGTGTTTGCCGCTAAACATAATGCAAATGCAACAAAGACTCAGAAGAGTTCTGATTCGCACCATTTCTCAAATGGGAATGTGTTTGCTGCAAAATGTGGCGCAAACGCAACAAATTATCAGAATTCTTATCCGAACTCCACTGGTTTCAGCAACCAAGGTGCACAGATGACATTCTGGACATCTTGCCAACATTGTGATGCTAAGTACCAGTACCCGATCCGATTTGTAAATGCAAACTTACTGTGTCAACAGTGTAAGAAGCCATTTAAAGCTCTTGCTAATGGTTTTGGAATCATGGGTGCGGCAACAGTGCTTACTTCAGTAAATATTCCGAAGGAGGCTCCAATGCATGGTCCCCCAAAACCAGCCTCAGAAAATACTGGTCGAAAACCCCTTGGTAGAGAACAAGCTGGTACGTTTGTGCGGTCAAATCCTACATCTATGAAAAAATGTGCTGCTGGAGTCGGTAGACGTTGTGGAGGTGAAAAGAGTAAAGATGGCAACATTCCTGCATCCAGTGATATGGAGCCACAGACCTCTCAAAATTTTGGAAGTAAAAGAGTAAGGCAGTCAGCACCAGATTCAGGAGAAAGTTTCAAAGCCAGAAATGGTGATGATACCAAAGCTGCCAATATTCGAGAAAATGCTGTTGATTCTTCAAATACAAGGAGATCTTCCAGGAAAAAGCAGCATGTTTCATATATTGAAACCTCTGAAGATGACGATTTTGAGATTCCTTCCAAAAAGCCACGACAAAGTGGACCACTTAATGCTGATGAAGCTGAGGAACAAAACGTGCCTGCAAGTGGTGAGTCGTCTGATAATAATATTCCAGCTACTCCCGGTGCGACTGATCAGAACAAAGAGAAGGTATCCGAGTCAGATATTGGTCTTGGAACGTCAAAGGAGGATAAGCGCTCCCCAAAAAATTCAAAGGTTCCTTCTCGTCCACGGATATTTCATTGTCCTGTTTCTGATACAGATTTCAATGATTTTGAGAAGGATAAGGAGGAGGATTGTTTTGCTGTTAATCAGTTGTGGGCAGTTTATGATAGCACTGATGCGATGCCAAGATTTTATGGTCTTGTCAAGAAAGTGGCCTCCCCTTTCCAGTTGAAGATTACTTGGTTGGAACCTGACCCAGATGACAAAGGTGAAATTGATTGGAATGATGCAGAATTGCCTATTGCTTGCGGTAAGTTTAGACTTGGTGGTTCTCAGCAAACTACAGATCGCTCCATGTTCTCTCATCAGGTGCGGTGCATAAAAGAAACCGGCAGAGGTTCTTATCTGGTATGTCCTAATAAGGGAGAAACATGGGCAATTTTCAGAGATTGGGATATCAACTGGAGTTCGAATCCAAAAAATCATCTGAAGTATGACTTCGAATATGTGGAAATCCTATCAGATTTTTCTGAGAATGTTGGCATCGCAGTTGCTTATATGGGCAAAGTGAAAGGATTTGTTAGCCTTTTTCAGAGAACGGAGAAGAATGGAGTAAACATATTTTATATCGAACCTAATGAACTATACAGGTTCTCACATCGAATTCCTTCTTATAAGATGACCGGTTATGAAAGGGAGGGTGTTCCAAGAGGATCATTTGAATTTGATCCAGCGGCCCTGCCGACTCATCTCTTTGAAGTTGGTGATTCTGGTAATGTAAAGATGTGA	2130	0.4296	MECNKDEALRARQIAEARMQRGEFAEALRFATKAKRLYADVENIAQIITVCEVHIAAQKKLSGCDMDWYAILQIERLADEATVKKQYRRLALLLHPDKNKFAGAEAAFKLIGQANGLLCDQAKRSLFDKKFGASVKGAAPKPKTSHNYSNGNVFAAKHNANATKTQKSSDSHHFSNGNVFAAKCGANATNYQNSYPNSTGFSNQGAQMTFWTSCQHCDAKYQYPIRFVNANLLCQQCKKPFKALANGFGIMGAATVLTSVNIPKEAPMHGPPKPASENTGRKPLGREQAGTFVRSNPTSMKKCAAGVGRRCGGEKSKDGNIPASSDMEPQTSQNFGSKRVRQSAPDSGESFKARNGDDTKAANIRENAVDSSNTRRSSRKKQHVSYIETSEDDDFEIPSKKPRQSGPLNADEAEEQNVPASGESSDNNIPATPGATDQNKEKVSESDIGLGTSKEDKRSPKNSKVPSRPRIFHCPVSDTDFNDFEKDKEEDCFAVNQLWAVYDSTDAMPRFYGLVKKVASPFQLKITWLEPDPDDKGEIDWNDAELPIACGKFRLGGSQQTTDRSMFSHQVRCIKETGRGSYLVCPNKGETWAIFRDWDINWSSNPKNHLKYDFEYVEILSDFSENVGIAVAYMGKVKGFVSLFQRTEKNGVNIFYIEPNELYRFSHRIPSYKMTGYEREGVPRGSFEFDPAALPTHLFEVGDSGNVKM	709

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Gma20g02154	709	MobiDBLite	consensus disorder prediction	418	439	-	-
Gma20g02154	709	SUPERFAMILY	Chaperone J-domain	64	131	IPR036869	-
Gma20g02154	709	Gene3D	DnaJ domain	64	188	IPR036869	-
Gma20g02154	709	ProSiteProfiles	dnaJ domain profile.	67	131	IPR001623	-
Gma20g02154	709	MobiDBLite	consensus disorder prediction	265	468	-	-
Gma20g02154	709	Pfam	Domain of unknown function (DUF3444)	476	677	IPR024593	-
Gma20g02154	709	MobiDBLite	consensus disorder prediction	440	463	-	-
Gma20g02154	709	CDD	DnaJ	67	120	IPR001623	-
Gma20g02154	709	PRINTS	DnaJ domain signature	69	87	IPR001623	-
Gma20g02154	709	PRINTS	DnaJ domain signature	87	102	IPR001623	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma20g02154	Gma-Chr20	48753507	48755636	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma20g02154	47	244	SUVH1 or 3-interacting DNAJ domain-containing protein superfamily	AT5G64360	27.094	2.35e-19	89.7

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma20g02154	-		-	gmx:102662460	1436.4

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma10g01557	10	42625000	42625956	Gma20g02154	20	48753507	48755636	GST

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