Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g02148 ATGACTAATCGTGTGGTTACCCTTTGGTACCGACCTCTTGAGTTGCTTCTTGGTGCCACAGAATATGGTGCGGCCATTGACCTTTGGAGTGTTGGTTGCATTTTAGGAGAGTTATTGGCAGGGAAGCCTATTTTGCCTGGTCGTACGGAGGTGGAACAACTGCATAAGATATACAAACTTTGTGGTTCGCCTTCTGATGAGTATTGGAAGAAGTCAAAGATGCCTAATGCTACCTTGTTTAAACCTCGAGAACCATACAAGAGATGCATAAGAGAGACATTTAAAGATTTTCCACCTTCAGCGCTGCCCCTTATTGACACTCTTCTTGCAATTGATCCTGCAGAACGGAAGAGTGCCACAAATGCTCTAAGAAGTGAGTTCTTTACCACAGAACCTTATGCTTGTGATCCTTCTAGTCTTCCAAAATATCCCCCAACCAAGGAAATGGATGCTAAACGACGGGATGATGAAACAAGGAGATCAAGAGTTGCTGGCAAAGCACACGTTGATGGTGCAAAGAAGCATCGTACTCGTGATCGCGCTGTAAAAGCTGCTCCTGCTCGTGAAGGCAATGCTGAGCTTCAATCCAACATTGATAGAAGGCGTTTAATCACTCATGCAAATGCTTAG 630 0.446 MTNRVVTLWYRPLELLLGATEYGAAIDLWSVGCILGELLAGKPILPGRTEVEQLHKIYKLCGSPSDEYWKKSKMPNATLFKPREPYKRCIRETFKDFPPSALPLIDTLLAIDPAERKSATNALRSEFFTTEPYACDPSSLPKYPPTKEMDAKRRDDETRRSRVAGKAHVDGAKKHRTRDRAVKAAPAREGNAELQSNIDRRRLITHANA 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g02148 209 Gene3D Transferase(Phosphotransferase) domain 1 1 168 - -
Gma20g02148 209 ProSiteProfiles Protein kinase domain profile. 1 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g02148 209 MobiDBLite consensus disorder prediction 136 194 - -
Gma20g02148 209 SUPERFAMILY Protein kinase-like (PK-like) 1 135 IPR011009 -
Gma20g02148 209 Pfam Protein kinase domain 1 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g02148 209 MobiDBLite consensus disorder prediction 146 186 - -
Gma20g02148 209 PANTHER OS01G0367700 PROTEIN 1 209 - -
Gma20g02148 209 PANTHER CELL DIVISION PROTEIN KINASE 1 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g02148 Gma-Chr20 48694999 48698802 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g02148 1 166 Core Cell Cycle Gene Families AT5G10270 54.491 8.02e-58 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Gma20g02148 Pkinase 2.8e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g02148 K08819 - gmx:100819318 429.098