Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g02145 ATGCCTGTTCCTAACGGAGAAGAGCAGGTTCTGTTACCTGAAAATGCAAGTGAGGTTTCAGAGTCACCCTCATTGAATTTGAACCCAGATTCAGTTGATGGGTCCCCACCTGTTTCCACCGTTTACACTGACGTGGGTGTCGTGCCAGAACACCAAAAGAACGAGCTTGAGCACTTGATATCCAATTTAGAAGGAGAAATCGAGGAACTGAGGCTCAAGCAAAAGAAATTGGATAAAAAGCGGAGAGAAGCATTGAGCAAGATATTGGACATCAAAGGGAGCATTCGAGTATTTTGTAGAATTCGACCGAATCTGGTTACGGAGAAGAGAAAAATTTCCGAACCGGTATCGGCTGGACCAGAGAAAATTCAGGTTAAGTTCGGGGGAACAAGGAAAGATTTTGAGTTTGATAAGGTTTTTAACCAAGAAGCAAGCCAAGGCTATGTTTTCGTTGATGTTGAGCCAATTCTAAGATCTGCAATGGACGGGCACAATGTGTGTGTTTTTGCTTACGGTCAAACAGGCACAGGCAAGACATTCACCATGGATGGAACAAACAAGGAGCCAGGAATAATTCCGCGTGCTCTTGAAGAGCTCTTTCGTCAAGCCTCTTTGGATAATTCATCTTCTTTTACCTTTACAATGAGCATGTTGGAAGTTTATATGGGCAATCTCAGGGATTTGTTATCTCCAAGACCATCCGGTAGACCACATGAACAATATATGACAAAGTGCAATCTCAATATTCAAACAGATCCAAAGGGATTGATTGAAATTGAGGGTCTCTCAGAAGTGCAAATAAGTGATTATGCTAAAGCCAAATGGTGGTACAACAAGGGCAAACGGTTTAGATCGACCTCATGGACTAATGTGAATGAGGCATCAAGCAGGTCACACTGCTTGACGAGGATAAGCATATTTCGACACGGGGATGCTTTGGAAGTCAAAAGTGAAGTAAGTAAATTGTGGATGATTGATCTTGGAGGGAGCGAACGGTTGCTTAAAACTGGAGCCAAAGGACTAACACTTGATGAGGGCAGAGCCATTAATCTTTCCCTTTCAGCTTTAGCTGATGTTGTTGCAGCTTTGAAGAGGAAGAGGTGTCATGTGCCTTACAGGAATAGCAAGCTGACTCAAATACTGAAAGATTCTCTTGGGTATGGCTCAAAGGTATTGATGTTGGTGCATATAAGCCCTTCCGAAGAAGATGTTTGCGAAACAGTTTGTTCCTTGAACTTTGCAAAGAGAGCGAGAGCAATAGAGTCCAACAAAGAAGTGCCAGTGGAAGTGAAGAAGCAAAGGGAGAAGAAGATTATGGAACTAGAGGAAGACATCAAGGAAGCCGTAAAACAGCGCCAGAATTTAAGGGAACAAATACAGAAGATTGAGTTGAAGTTAAATGAGTGTAAAAAGCTCGCATCAACCACATATAGTGTTGTGGAAAGTGATGACATTGCAACCTCAACTAGCCTCAAAGATGATGTCAAAGAGGTCATTGAAACCCCTAAAACATCCAAGAAGTCCATTAAAAGAAATTTCTCCAATTCAACGCCTCGATTCATGACTTCAACTGTTGCAAGTCGCCAAAGGCAAAGTGCTGCAGAACGAGACATTAGTACTGTGAGATTGAAAAGTTTTAGATCTATTATCTCTAAAAGTTCCAATAATTATTCATATTCCCAATCAATGAGTTACTCAGATATCCGCATCAAAGCAATACTACGAAGTTCAAATGGAAAATCTCGGTATGCTGAAGCAGATAGTGTTCCAATTCCAAACACTGTTCTCACAGAAAAGCCTAAATGCAATGATATGGAATCAAAAGTGACTACTCCTCGAAGCAAGATGGTTACATCATCAGACCAAAACTTTAGAGTTTCATTGGGTCGTCACAGGAGAAGGATGTCTGATCTGATCTAA 1920 0.4146 MPVPNGEEQVLLPENASEVSESPSLNLNPDSVDGSPPVSTVYTDVGVVPEHQKNELEHLISNLEGEIEELRLKQKKLDKKRREALSKILDIKGSIRVFCRIRPNLVTEKRKISEPVSAGPEKIQVKFGGTRKDFEFDKVFNQEASQGYVFVDVEPILRSAMDGHNVCVFAYGQTGTGKTFTMDGTNKEPGIIPRALEELFRQASLDNSSSFTFTMSMLEVYMGNLRDLLSPRPSGRPHEQYMTKCNLNIQTDPKGLIEIEGLSEVQISDYAKAKWWYNKGKRFRSTSWTNVNEASSRSHCLTRISIFRHGDALEVKSEVSKLWMIDLGGSERLLKTGAKGLTLDEGRAINLSLSALADVVAALKRKRCHVPYRNSKLTQILKDSLGYGSKVLMLVHISPSEEDVCETVCSLNFAKRARAIESNKEVPVEVKKQREKKIMELEEDIKEAVKQRQNLREQIQKIELKLNECKKLASTTYSVVESDDIATSTSLKDDVKEVIETPKTSKKSIKRNFSNSTPRFMTSTVASRQRQSAAERDISTVRLKSFRSIISKSSNNYSYSQSMSYSDIRIKAILRSSNGKSRYAEADSVPIPNTVLTEKPKCNDMESKVTTPRSKMVTSSDQNFRVSLGRHRRRMSDLI 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g02145 639 MobiDBLite consensus disorder prediction 15 38 - -
Gma20g02145 639 ProSiteProfiles Kinesin motor domain profile. 94 420 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma20g02145 639 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 94 461 IPR027417 -
Gma20g02145 639 Coils Coil 431 472 - -
Gma20g02145 639 Coils Coil 53 87 - -
Gma20g02145 639 Gene3D Kinesin motor domain 89 465 IPR036961 -
Gma20g02145 639 SMART kinesin_4 92 428 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma20g02145 639 PRINTS Kinesin heavy chain signature 163 184 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma20g02145 639 PRINTS Kinesin heavy chain signature 370 391 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma20g02145 639 PRINTS Kinesin heavy chain signature 321 339 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma20g02145 639 PRINTS Kinesin heavy chain signature 289 306 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma20g02145 639 PANTHER KINESIN-LIKE PROTEIN KIN-14D ISOFORM X1 18 634 - -
Gma20g02145 639 MobiDBLite consensus disorder prediction 1 39 - -
Gma20g02145 639 Pfam Kinesin motor domain 121 420 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma20g02145 639 PANTHER KINESIN-LIKE PROTEIN KLP-3 18 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g02145 Gma-Chr20 48680290 48683736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g02145 52 420 Calmodulin-binding Proteins AT5G65930 38.462 4.89e-71 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g02145 - - gmx:100778856 1204.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g02145 20 48680290 48683736 Gma20g02145 20 48680290 48683736 ECH
Gma10g01567 10 42718231 42721671 Gma20g02145 20 48680290 48683736 GST