Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g02136 ATGTTTTCCCTCTCAAAACCCCACTTCTCTCTGATTTGTTGCGGCACCCGCGAGCTACGCGAACGAATCCAAACAGTCCAAACCACACAAAAGATCACCGAAGCCATGAAACTTGTCGTCGCCGTGCGCGTCCGCCACGCCCAGGAGGCCACCGTCAGCGGCCGCCCCTTCTCCTCGAACCTTGCCGCAAATGCTCAACGACATCACAGTGCCTCCAAAATGATGCCATATCCACCCCTCTCACCCATGCCAAACCCGTGA 261 0.567 MFSLSKPHFSLICCGTRELRERIQTVQTTQKITEAMKLVVAVRVRHAQEATVSGRPFSSNLAANAQRHHSASKMMPYPPLSPMPNP 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g02136 86 Pfam ATP synthase 16 68 IPR000131 GO:0015986|GO:0045261|GO:0046933
Gma20g02136 86 PANTHER ATP SYNTHASE GAMMA CHAIN, CHLOROPLASTIC-LIKE 7 63 - -
Gma20g02136 86 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 16 65 IPR035968 GO:0015986|GO:0045261|GO:0046933
Gma20g02136 86 MobiDBLite consensus disorder prediction 58 86 - -
Gma20g02136 86 PANTHER ATP SYNTHASE GAMMA CHAIN 7 63 IPR000131 GO:0015986|GO:0045261|GO:0046933
Gma20g02136 86 Gene3D ATP synthase, gamma subunit, helix hairpin domain 17 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g02136 Gma-Chr20 48586744 48587004 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g02136 12 61 Primary Pumps ATPases AT1G15700 64.000 3.49e-15 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g02136 K02115 - gmx:100797879 91.6633