Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g02134 ATGGAATCCGATCTAAACGACGCCGTTTTTCCcgaagaagatctcgacgacgacgacgaaactccagaggatgaagaggaggaggaggacgacgacgtcttagatgacgatgaAACCGAACCCCCTCCCTCCGTCATCGCCGTCGCGCCGCCCGCTTCCCAAACGCTCGACACCGCGTTAATTCCGATCTCCTCCGTCGCGGATTCCTCGCCGAAACCGCTGCGCACGGAGCTAATCGAGGAGAAAAAAGCGCTGGACGATTCGCGGCGACTGTTCCAGCGTCTGTGGACAGACGAGGACGAGATCGGGCTCTTGCAGGGTTTTCTGGAGTACACGGCGCAGCGAGGATCCTCTCACCACAACGACACCGCCCTGTTCTACGACCAAATCAAGTCGAAGCTCCAACTCGGCTTCAACAAGAACCAGCTCGTCGAGAAGCTCCGAAGGCTGAAGAAGAAGTACCGCAACGTCCTCAACAAAATCAGCTCCGGCAAGGAAGTCTCTTTCAAGAGCCCTCACGACCGAGCCACCTTCGAAATCTCGCGCAGGATCTGGAGCAACACCGCTCCAATCACCGGTCCCGTCGAAGACGACGACGAAATCATCACTAACCCTAATTTCGGCAATTCGGCGAAGATGCCTATTTCGCGGAAGCGGTCGCGGCCTCAGAAGCGCGAGTTGAACGAcggttcaacgttgaatagagataataattgcaatagtaacagtaataataataataataatgagaattgtaatagtaggcttaacttacagggtttGATTGAAGAGACGGTGAGGAGTTGCGTGTCGCCGGTGTTGAAGGAGTTGGCGTGTGGTACTGGTGGCATGGGATTGGGAAGAGGGTTCGCATTGAATCCCTTGCAAATGCCAATGCCAATGAGTTTAATGAATTTGGGGATTGTTGGGGAAACGGCGATGGATGAGAAGTGGAGGAAGCAACAGATTCTGGAGCTGGAAGTGTATTCCAAACGTTTGGAATTGGTGCAGAATGAGATCAAGGTTGCTCTCGAGGAATTGCGTTCAGCTGGTGGAGGATGA 1062 0.4576 MESDLNDAVFPEEDLDDDDETPEDEEEEEDDDVLDDDETEPPPSVIAVAPPASQTLDTALIPISSVADSSPKPLRTELIEEKKALDDSRRLFQRLWTDEDEIGLLQGFLEYTAQRGSSHHNDTALFYDQIKSKLQLGFNKNQLVEKLRRLKKKYRNVLNKISSGKEVSFKSPHDRATFEISRRIWSNTAPITGPVEDDDEIITNPNFGNSAKMPISRKRSRPQKRELNDGSTLNRDNNCNSNSNNNNNNENCNSRLNLQGLIEETVRSCVSPVLKELACGTGGMGLGRGFALNPLQMPMPMSLMNLGIVGETAMDEKWRKQQILELEVYSKRLELVQNEIKVALEELRSAGGG 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g02134 353 MobiDBLite consensus disorder prediction 196 251 - -
Gma20g02134 353 MobiDBLite consensus disorder prediction 1 52 - -
Gma20g02134 353 MobiDBLite consensus disorder prediction 232 251 - -
Gma20g02134 353 Coils Coil 140 160 - -
Gma20g02134 353 Coils Coil 319 346 - -
Gma20g02134 353 MobiDBLite consensus disorder prediction 1 39 - -
Gma20g02134 353 PANTHER BNAANNG10740D PROTEIN 1 351 - -
Gma20g02134 353 PANTHER BNAANNG10740D PROTEIN-RELATED 1 351 IPR007592 GO:0006355
Gma20g02134 353 Pfam Protein of unknown function, DUF573 92 186 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g02134 Gma-Chr20 48584150 48585740 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g02134 43 353 GeBP Transcription Factor Family AT5G28040 48.485 2.37e-89 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Gma20g02134 DUF573 1e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g02134 - - gmx:100817182 612.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01575 10 42845199 42847047 Gma20g02134 20 48584150 48585740 GST