Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g02133 ATGCTTTCCCCGTTGGTTTCTTGGATCTTGTCTCCCTCCTCTTCCTCCTCCTCTTCCGAAGAAGAAGAAGAAGAGATCCTTGACATTATCACAGATAATGACATTAACCATGAAAATGACCAAAAGCTCAATGTAGAAGATGACGAGTGTGATGTGGACAACACCATTCCCGTTGCACTTGCTGTTCCCAATGCCTCCCCCGCCGTGACAGTGGCCTTCCCGGCCAATGACGAAAGAAACACCATCCCAGTCACCGCCACTGCCACCACTGTCGTAACATGCTCAAAAGGGCAGCGCAACGCCAAGTATTCCGGAATGGTGAGACAATACCAAAGGCTGTGGACGAAGGAGGATGAGATGGAACTGTTGAAGGGATACCTTGATTACGTCAAGCGGCATAGAAAGGAAACCACCACCCTCCAAAGCGTCGTAGCCTCGTTGTATGATCACGTAAGGCCCAAACTGAACGTGAGTTTCAACAAAAATCAGCTTGTTGAGAAACTGCGTAGGTTAAAGAGAAAACACAAGTTAGCTTTGGACAAAGACAAGGACAAGGAGGTTCCCTTTAGAAACCCCCAGGAGCAGGCCATTTTTGAAATTTCCCACAAGATTTGGGGCATTGACACGGATAATATAATAGACCAAGATGCCTTGGATGGTTATGAATCAGGACACACTCCTGAAAGTCATGATCATGTTGGCAACATCAAGGTGAAGATTGAACAACTTGACAACAATGATGAAATAGATAATAGAGTGCCAAAGCGGTTGCGGCTAGATGATGCAGATGATGTGAACAAAACAAATGACCAAAACAATGGTGATAGCATACAAGGCTTCATTGAGGAGACCATGAGGTCATGTTTCCCACCATTGCTGAAGGAAGTGTTGCATGATGCACATGAAGAGCCACTTCCTGAGTTGGAGCCAATCCCAATGCCACTATGCCCTGGGGAAGTGGACCATGAACAATGGAGAAAACGGAGGATTTTGGAGTTGGAGGTGTATGTGAAGCGGTTGGAGTTGTTGCAGGATCAGATCAAGTCTAGATTGGAAGAGTTGCGATCTAACTGA 1074 0.4618 MLSPLVSWILSPSSSSSSSEEEEEEILDIITDNDINHENDQKLNVEDDECDVDNTIPVALAVPNASPAVTVAFPANDERNTIPVTATATTVVTCSKGQRNAKYSGMVRQYQRLWTKEDEMELLKGYLDYVKRHRKETTTLQSVVASLYDHVRPKLNVSFNKNQLVEKLRRLKRKHKLALDKDKDKEVPFRNPQEQAIFEISHKIWGIDTDNIIDQDALDGYESGHTPESHDHVGNIKVKIEQLDNNDEIDNRVPKRLRLDDADDVNKTNDQNNGDSIQGFIEETMRSCFPPLLKEVLHDAHEEPLPELEPIPMPLCPGEVDHEQWRKRRILELEVYVKRLELLQDQIKSRLEELRSN 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g02133 357 MobiDBLite consensus disorder prediction 1 24 - -
Gma20g02133 357 Coils Coil 337 357 - -
Gma20g02133 357 PANTHER BNAANNG10740D PROTEIN-RELATED 1 357 IPR007592 GO:0006355
Gma20g02133 357 Pfam Protein of unknown function, DUF573 111 206 IPR007592 GO:0006355
Gma20g02133 357 MobiDBLite consensus disorder prediction 1 17 - -
Gma20g02133 357 Coils Coil 161 181 - -
Gma20g02133 357 PANTHER TRANSCRIPTION FACTOR GEBP FAMILY-RELATED 1 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g02133 Gma-Chr20 48574445 48575518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g02133 56 356 GeBP Transcription Factor Family AT5G28040 31.694 7.94e-46 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Gma20g02133 DUF573 4.7e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g02133 - - gmx:102659511 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01577 10 42856280 42858050 Gma20g02133 20 48574445 48575518 GST
Gma19g02286 19 51597137 51600875 Gma20g02133 20 48574445 48575518 PCT
Gma03g02251 03 47837212 47838971 Gma20g02133 20 48574445 48575518 PCT
Gma20g02133 20 48574445 48575518 Gma19g02286 19 51597137 51600875 PCT
Gma20g02133 20 48574445 48575518 Gma03g02251 03 47837212 47838971 PCT