Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g02089 ATGGCGGATTCTTCAAGCAACTCAAAGGATCACCACAACACCCGCGTCTACCACCCTTACCAGGACCTCAACGTCCCCATTCAGAAGCTCTACAACCTCCCCACCGCGCCGGAGCACCTCTTCCCCGAAGAAGCCGCCAGGACCCACCGCTCCTGGGGTGACAACCTCCAGTACTACACCGGCTCCGGCTACCTCGCCGGCGCCATAACCGGCGCCGCCAGGGGCACCGTCCAGGGCCTCCGCGAGGCCGAGTCCGCCGACTCCCTCAAAATCCGACTCAACCGAGTACTCAACTCGGGGGGCCTCGCGGGTCGCAGACTCGGCAACTCGCTCGGCGTGGTGGGCCTCATCTTCGCCGGCCTCGAGAGTGGGATGACCCACTTAAGGGGCACCGATGACCTCGTCAACAGCGCCGTCGCCGGACTCGGCACCGGAGCTCTCTATAGGGCCGCCGCCGGACCCCAATCCGCCGCTATTGCCGGTGCGATAGGTGGGATCGCCGCCGCCGCAGCGGTCGCCGGGAAGCAAGCTTTGAAAAGATACGTGCCGATCTAG 555 0.6541 MADSSSNSKDHHNTRVYHPYQDLNVPIQKLYNLPTAPEHLFPEEAARTHRSWGDNLQYYTGSGYLAGAITGAARGTVQGLREAESADSLKIRLNRVLNSGGLAGRRLGNSLGVVGLIFAGLESGMTHLRGTDDLVNSAVAGLGTGALYRAAAGPQSAAIAGAIGGIAAAAAVAGKQALKRYVPI 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g02089 184 Pfam Tim17/Tim22/Tim23/Pmp24 family 58 166 - -
Gma20g02089 184 PANTHER TIM23 2 184 IPR045238 GO:0022857
Gma20g02089 184 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-3 2 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g02089 Gma-Chr20 48135903 48136457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g02089 3 180 Chloroplast and Mitochondria Gene Families AT1G17530 56.111 1.90e-62 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g02089 K17794 - gmx:100803835 325.865