Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gma20g02058 | ATGTTTCTAATCACTCTTTGGCTTTTACTATCTCACCATGCCAACGCTGAAAGTTCCACGTATATTGTTCACATGGACAAGTCCCTGATGCCTCAAGTCTTTGCAAGCCATCACGATTGGTACGAATCCACCATTCATTCCATAAACTTAGCAACAGCTGATGATCCCTCTGAGCAACAGAAATTAGTGTACACTTACGATGATGCAATGCATGGATTCAGTGCAGTGCTATCATCAGAGGAGTTGGAGACCCTAAAGAACACTCATGGTTTTGTCACAGCTTACCCTGATAGATCTGCCACCATAGACACCACACACACCTTTGAGTTTCTCTCTTTTAATCCCTCCAATGGCCTGTGGAATGCTTCAAATTTTGGAGAAGGTGTCATTGTGGGTATGATTGACACAGGTGTCTGGCCTGAAAGTGAGAGCTTCAAAGATGATGGCATGAGCAGAAACATCCCTTCCAAATGGAAAGGAACATGCGAGCCAGGACAAGACTTCAATACCTCCACGTGTAACTTCAAGTTAATTGGGGCTAGGTACTTCAACAAGGGTGTGAAAGCAGCGAATCCCAACATCACAATAAGAATGAACTCAGCGAGAGACACTCGGGGACATGGAAGCCACACATCATCCACTGTTGCTGGCAACTATGTTAATGGTGCTTCTTTCTTTGGCTACGCCAAAGGGGTAGCAAGAGGCATTGCACCAAGAGCTAGGCttgccatgtacaaggtcctttgggacgaagggggtcacggctctgatgttcttgcaggaatggaccaagccattgctgATGGGGTTGATGTCATTTCAATCTCATTGGGCTTTGATAGTGTTCCACTTTATGAGGATCCGGTGGCAATAGCTGCTTTTGCAGCAATGGAAAAAGGGGTGTTGGTTTCATCTTCAGCAGGAAACGCAGGTCCTATACTTGGCACCTTGCACAATGGAATCCTTTGGGTCTTAACCGTGGCAGCAGGCACCATAGACCGCACATTTGGAAGCTTGACACTGGGAGATGGTAAAATCATTGTGGGTTGTACCTTGTTTGCTGCTAACTCAATAGTGGAGAAGTTTCCACTTATTTACAACAAGACTGTATCAGCATGCAACTCGGTTAAACTATTAACCGGAGTAGCCACAAGAGAGATCATTATATGTGATGCCTTGGACTCAGTTTCTGTCTTAACCCAAATAGCTTCTGTTACCGCGGCCAGTGTGTATGGGGCTGTGTTTATCTCTGAGGATCCAGAACTAATTGAAAGAAGACGTTTGTTCACTCCAAGCATTGTGATCAGCCCAAATGATGCAAAATCGGTGATCAAGTACGCGAAAAGTGCTCAAAAACCATTTGCCAGCATCAACTTTCAACAAACATTTGTTGGAATAAAGCCAGCACCAGCTGTTGCAATTTACTCTTCAAGAGGTCCTTCACCAAGCTACCCGGGGATCTTGAAGCCTGATGTAATGGCACCTGGCTCCAATGTTCTGGCTGCTTTTGTTCCAAATAAACCTTCAGCCAGAATTGGCACAAATGTGTTTTTGTCAAGTGACTACAATTTCTTGTCTGGAACATCCATGGCATGTCCTCATGCATCTGGTGTTGCTGCTCTTTTGAAAGCAGCACACCCTGATTGGAGTGCAGCTGCTATAAGATCTGCATTGGTTACAACTGCTAATCCCCTTGATAATACTCAAAATCCAATCAGGGATAATGCAAACCTATTTCAATATGCTTCTCCTCTTGCTATGGGAGCTGGTGAGATTGAACCTAATAGAGCACTTGATCCTGGTCTCATATATGATGCCACCCCTCAGAACTATGTTAACCTCCTTTGTGCTTTGGGATACACAAACAACCAAATCTTATCCATCACAAGATCAAGGTCCTATGAATGTTCTGCCAACCCCTCATCTGATCTTAACTACCCTTCGTTTATAGTTTTGTATAGTAACAAAACAAGATCAACAGTCCGAGAGTTTAGGAGGATCGTGACCAATGTTGGAGATGGTGCTGCTACTTACAAAGTCAAGGTGACACAACCCAAGGGCTCTGTTGTCAAGGTGTCACCTGAGACATTGGCATTTGGCTATAAGAATGAGAAGCAGAGCTACTCTGTTACTGTAAAGTACACAAGAAACAAGAAAGAAAACATCTCATTTGGGGACATTGTTTGGGTCGAAGATGGTGGTGCACGCACGGTTAGAAGCCCCATTGTAGTGGCACCCAATGAACTTGCATGA | 2253 | 0.4265 | MFLITLWLLLSHHANAESSTYIVHMDKSLMPQVFASHHDWYESTIHSINLATADDPSEQQKLVYTYDDAMHGFSAVLSSEELETLKNTHGFVTAYPDRSATIDTTHTFEFLSFNPSNGLWNASNFGEGVIVGMIDTGVWPESESFKDDGMSRNIPSKWKGTCEPGQDFNTSTCNFKLIGARYFNKGVKAANPNITIRMNSARDTRGHGSHTSSTVAGNYVNGASFFGYAKGVARGIAPRARLAMYKVLWDEGGHGSDVLAGMDQAIADGVDVISISLGFDSVPLYEDPVAIAAFAAMEKGVLVSSSAGNAGPILGTLHNGILWVLTVAAGTIDRTFGSLTLGDGKIIVGCTLFAANSIVEKFPLIYNKTVSACNSVKLLTGVATREIIICDALDSVSVLTQIASVTAASVYGAVFISEDPELIERRRLFTPSIVISPNDAKSVIKYAKSAQKPFASINFQQTFVGIKPAPAVAIYSSRGPSPSYPGILKPDVMAPGSNVLAAFVPNKPSARIGTNVFLSSDYNFLSGTSMACPHASGVAALLKAAHPDWSAAAIRSALVTTANPLDNTQNPIRDNANLFQYASPLAMGAGEIEPNRALDPGLIYDATPQNYVNLLCALGYTNNQILSITRSRSYECSANPSSDLNYPSFIVLYSNKTRSTVREFRRIVTNVGDGAATYKVKVTQPKGSVVKVSPETLAFGYKNEKQSYSVTVKYTRNKKENISFGDIVWVEDGGARTVRSPIVVAPNELA | 750 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gma20g02058 | 750 | Gene3D | - | 615 | 746 | - | - | |
| Gma20g02058 | 750 | CDD | PA_subtilisin_like | 338 | 457 | - | - | |
| Gma20g02058 | 750 | PRINTS | Subtilisin serine protease family (S8) signature | 126 | 145 | IPR015500 | - | |
| Gma20g02058 | 750 | PRINTS | Subtilisin serine protease family (S8) signature | 203 | 216 | IPR015500 | - | |
| Gma20g02058 | 750 | PRINTS | Subtilisin serine protease family (S8) signature | 526 | 542 | IPR015500 | - | |
| Gma20g02058 | 750 | CDD | Peptidases_S8_3 | 101 | 563 | IPR034197 | - | |
| Gma20g02058 | 750 | PANTHER | OS01G0868800 PROTEIN | 20 | 745 | - | - | |
| Gma20g02058 | 750 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 20 | 745 | IPR045051 | - | |
| Gma20g02058 | 750 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 527 | 537 | IPR023828 | - | |
| Gma20g02058 | 750 | Pfam | Fibronectin type-III domain | 643 | 744 | IPR041469 | - | |
| Gma20g02058 | 750 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 105 | 598 | - | - | |
| Gma20g02058 | 750 | Pfam | Subtilase family | 126 | 569 | IPR000209 | GO:0006508|GO:0008236 | |
| Gma20g02058 | 750 | Pfam | Peptidase inhibitor I9 | 20 | 100 | IPR010259 | - | |
| Gma20g02058 | 750 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 9 | 102 | IPR037045 | - | |
| Gma20g02058 | 750 | Gene3D | - | 333 | 464 | - | - | |
| Gma20g02058 | 750 | Gene3D | Peptidase S8/S53 domain | 128 | 611 | IPR036852 | GO:0004252|GO:0006508 | |
| Gma20g02058 | 750 | SUPERFAMILY | Subtilisin-like | 104 | 602 | IPR036852 | GO:0004252|GO:0006508 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gma20g02058 | Gma-Chr20 | 47822082 | 47824413 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Gma20g02058 | 16 | 745 | Subtilisin-like Serine Gene Family | AT5G67090 | 42.287 | 0.0 | 546 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gma20g02058 | - | - | gmx:100806072 | 1347.03 |