Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g02037 ATGAAAGGGGGGCGATCGCACCGCCCTCGGAGCTCGGACCCGCCGGACGAGTGGGTGGACGGGTCCTGGACGGTGGACTGCATCTGCGGCGTCACCTTCGACGACGGCGAGGAGATGGTGAAATGCGACGAGTGCGGCGTGTGGGTCCACACGCGCTGCTCGCGCTACGTGAAGGGCGACGACACCTTCTCCTGCGACAAGTGCAAGGCCAGGCacaacaaaaacaacaccaccaacaacaacagcaacagcaacaacaacagcaacagcaCTACCAACCCCATGGAGACCGAGGTCGCGCAGTTCCTCGTCGAACTCCCCACAAAAACCATCTCCATGGACAATAAAAAAGCCCTCCCCTCCAGGCCCAGGCTCTGGACCGACAAGCCCATCGAGGAGCGGGTCCACGTCCAGGGCCCACCGGGCGGCGACCCCTCCATCTTCGCCGGCCAAAGCGCCTCCTCGATTTTCACGCCCCAGCTCTGGAAGGCATGCGGGTATGTCCCCAAGAAGTTCAATTTTAAGTACAACGAGTTCCCTTTCTGGAATAATAACAACGATAAGGAGGGTGTGCCAGCAAAAGATGGTAATAATAACGATAATGGGGTTGGGGTGTCTAAAGAGGCTAATAACACTGCTGCTGCTCCCCCTGTTGCGCCTTCGGTTGAAACGAGATCTGGTCACGCCAAGGACGCGGACACGGGCAAGTTTGGGAGCCAGGATGTGCCGCCACGTGTCCACGGTGACGTCAAGAAGGAGCGGACTCTGCTGAGGCCTCCGGTTGTTCATAACAGTAAACGCAGTAAAGGGGATTTGGGGAATTCGAGTTCCAAGGAGAGGATTGGGAAGAAACGCCTTAGGACTTCTGACAGGGAGGTAGATTCCAGGAAGAGAACGCTGCATTCCTCCAAATCAGCGTTTACGCCCACCGGTGATGGAAAACAATTGGACTTTTATGAGGACAGAGGATCAAAGATGTTCAAGGCTGATGCTCGGAGCATAAAGAATAAAAACTTAAAAGACATGGTGGTTCAAGAGCATGTGTCTGATGATCCTGTTGCTGTGGATACTATCATGGAGGAGTCAAATAACAACTTAACCACTACTGAGGACTCCTCAGAACCGTTATATCCTGACATGACTAAACATGGTGTTTCTGTTGGAGATGTTGTAGCAGAAGAGAAGGCTAGTCGTAAAACTCCTACTTTGGTTGAGATGTCTTCTAAGACTGATGATGCTGTTACATCAGCTTTAAAGCAGAATTATGTTGGAAATGCTTCAGTTAAAGAAAAGGATGGAGATTGCTTGGTAGCTGATAATGCAGATGATGCTTTAGTAGTAAGAAGCGCTGCTAGTCCTCTCACAGAAGGTCATTGTGTTTCTGCACCAGAACTTGTGGATAACCAAGTTTCTCAAGATCTTGGCCGTAACATGCGTCCTAGCTCTGCAAAATGCAAAGTTAAGATGGGGAGAGATGATAATGTTGATAATTTTCGGAAGCCCTCAAATTTTCATTCTTCTCCTATCAGTGATCATAAAAACAATGAAAAACCATCTGATCACACATCTGATATTGTTAAAGTGAATGATGCTCCAGTTCCCAGTTTACCATCATGTGAAAGTAAGGTGGGTGGTGTTGACATTTCATCAGAACTAATCCCTGCTGATCATACCAATAAACCAATTGAATTATCTGGTGATTTTTGTCAAAGAAAACTAGAACCGGTGGGGTCTGAAGGTTCCTTGGAAACACAAAAGGGATTTTCAGAAACAAAAGATGGTTTGGATGCTGCTAAAGATCCATCAAAATCTGAAGCACTTGGATGTTCGCCTAAAGTTGGAAAGTCATCTCCGACTTCATCAACCATGAACTCCAAATCATTGGGTCATGACTGCAGATCTGAAGATACTGAAATCCCTAATTCTTTTACGAAGCATGGAGTGATGGCTGATAGTAACATTCACACAAAGAATGAAAATTGTCCAAGTGTTGCTGCCAGGGATGAAAATTCAAAGAAGTCTGTAAAAGAGCGACCAAAATCCTCTTTGAATTCCAATTCAAAAGGATTGCATTCAAGCAGGAGTGTGCAAAATTCTGTCTCAAAGCAAGTGAACTCAGATGCGAGAGATTCTGTTCATGTTTTGTCTTCTAAACCTTTGATACATCAGACTGCAAGTATTTTAGGCTCTAGTGAGTCTAACCATCAGAAGGTTTTACAAGTGCAGAGTAAGATTTCTTCTTCAGCGCCCCAGAAAGTTGAAAAACTTAACCAAACAAACATCCACACTTCCTCCAAGTTGAACCAAAGTCATGTTCCATCAGTGAATCCTTCTTTAATATCGAATTCTTCAATGCTGAGTGATGAAGAGCTTGCTCTGCTATTGCATCAAGAACTGAATAGTTCTCCTCGTGTACCTCGTGTACCCCGAGCACGCCATGCAGGTAGCTTGCCCCAGTTGACTTCCGCTAGTGCTACAAGCATGCTGATGAAGCGAACATCGGGTGGAGGAAAGGATCATTATTTTGCATCTAGACGAAAACACAAGGATGCATCTAGAGATGGGTCTGGCAGTTCTCGTGAACTTGAATACGAAGCTAAAAGGATAGAGAAGGAGAAGGGTCCATCCTCGTCTGATCAGAGGAAACAGGATATGTCATACGCGGAAGATGCTCCTGCAAGGGAAGAAGGCCTTGCATCTATGGCAGCAGCAAACTCCATCACCAACAATACTGTTTCTTCCACCTCTGGAATTGCAAACAGTGATGCATCCACTCCTCCTGAGGATCAGAATTTGTCATCTATGCGTAACTCACCTAGGAATGTATCTGATGATGATACAGCAACTGCTGGAAGGCCAGTTCATCGCACCTTACCTGGTTTAATCAATGATATAATGAGCAAAGGCAGGCGTATGACATATGAGGAACTCTGTAATGCTGTGCTACCGCACTGGCATAACTTGAGGAAACATAATGGAGAGCGTTATGCTTACTCAAGTCACTCTCAGGCTGTTCTTGATTGTTTGAGGAACCGGCATGAATGGGCAAGGTTGGTTGATCGTGGTCCAAAGACAAATTCTAATAGGAAAAGGCGTAAGCTGGATGCTGAAGAGTCTGATGATAATGGATATGGCAAGGGAAGAACTGCAAAAGATGTTGAAGGGAAGAACTTTGAGTTGCAAAAAGAAGAGTTCCCTAAAGGCAAGCGTAAAGCTCGAAAACGCAGGCGCCTTGCTCTTCAGGGAAGAGCAGTGAAGGATGTCAGAAGGAGACAGAAAGCTGACTCGCTAACGGATGAGGATCTCGGTCCATTCTCCAATTCTAGTGAAGAGAGCATGTTCAGTGAAGATGAAATTCAGGCTGGCAGAATACGTCCAGCAGGAAGTTCATCAGATGAGGCAGTCTTTGCGAGCTTGTTCAGTGGAGGATGGATTGCGGGTGCTTGGTGCAATGTCACAGCGTATCAGTAG 3471 0.4578 MKGGRSHRPRSSDPPDEWVDGSWTVDCICGVTFDDGEEMVKCDECGVWVHTRCSRYVKGDDTFSCDKCKARHNKNNTTNNNSNSNNNSNSTTNPMETEVAQFLVELPTKTISMDNKKALPSRPRLWTDKPIEERVHVQGPPGGDPSIFAGQSASSIFTPQLWKACGYVPKKFNFKYNEFPFWNNNNDKEGVPAKDGNNNDNGVGVSKEANNTAAAPPVAPSVETRSGHAKDADTGKFGSQDVPPRVHGDVKKERTLLRPPVVHNSKRSKGDLGNSSSKERIGKKRLRTSDREVDSRKRTLHSSKSAFTPTGDGKQLDFYEDRGSKMFKADARSIKNKNLKDMVVQEHVSDDPVAVDTIMEESNNNLTTTEDSSEPLYPDMTKHGVSVGDVVAEEKASRKTPTLVEMSSKTDDAVTSALKQNYVGNASVKEKDGDCLVADNADDALVVRSAASPLTEGHCVSAPELVDNQVSQDLGRNMRPSSAKCKVKMGRDDNVDNFRKPSNFHSSPISDHKNNEKPSDHTSDIVKVNDAPVPSLPSCESKVGGVDISSELIPADHTNKPIELSGDFCQRKLEPVGSEGSLETQKGFSETKDGLDAAKDPSKSEALGCSPKVGKSSPTSSTMNSKSLGHDCRSEDTEIPNSFTKHGVMADSNIHTKNENCPSVAARDENSKKSVKERPKSSLNSNSKGLHSSRSVQNSVSKQVNSDARDSVHVLSSKPLIHQTASILGSSESNHQKVLQVQSKISSSAPQKVEKLNQTNIHTSSKLNQSHVPSVNPSLISNSSMLSDEELALLLHQELNSSPRVPRVPRARHAGSLPQLTSASATSMLMKRTSGGGKDHYFASRRKHKDASRDGSGSSRELEYEAKRIEKEKGPSSSDQRKQDMSYAEDAPAREEGLASMAAANSITNNTVSSTSGIANSDASTPPEDQNLSSMRNSPRNVSDDDTATAGRPVHRTLPGLINDIMSKGRRMTYEELCNAVLPHWHNLRKHNGERYAYSSHSQAVLDCLRNRHEWARLVDRGPKTNSNRKRRKLDAEESDDNGYGKGRTAKDVEGKNFELQKEEFPKGKRKARKRRRLALQGRAVKDVRRRQKADSLTDEDLGPFSNSSEESMFSEDEIQAGRIRPAGSSSDEAVFASLFSGGWIAGAWCNVTAYQ 1156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g02037 1156 MobiDBLite consensus disorder prediction 817 831 - -
Gma20g02037 1156 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SET-26-RELATED 1 1134 - -
Gma20g02037 1156 ProSitePatterns Zinc finger PHD-type signature. 27 68 IPR019786 -
Gma20g02037 1156 MobiDBLite consensus disorder prediction 1020 1067 - -
Gma20g02037 1156 MobiDBLite consensus disorder prediction 680 711 - -
Gma20g02037 1156 SUPERFAMILY FYVE/PHD zinc finger 15 74 IPR011011 -
Gma20g02037 1156 MobiDBLite consensus disorder prediction 272 301 - -
Gma20g02037 1156 MobiDBLite consensus disorder prediction 245 260 - -
Gma20g02037 1156 MobiDBLite consensus disorder prediction 838 891 - -
Gma20g02037 1156 MobiDBLite consensus disorder prediction 1020 1117 - -
Gma20g02037 1156 MobiDBLite consensus disorder prediction 74 93 - -
Gma20g02037 1156 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 16 92 IPR013083 -
Gma20g02037 1156 MobiDBLite consensus disorder prediction 912 945 - -
Gma20g02037 1156 MobiDBLite consensus disorder prediction 613 628 - -
Gma20g02037 1156 MobiDBLite consensus disorder prediction 804 894 - -
Gma20g02037 1156 MobiDBLite consensus disorder prediction 912 955 - -
Gma20g02037 1156 MobiDBLite consensus disorder prediction 487 543 - -
Gma20g02037 1156 SMART PHD_3 26 69 IPR001965 -
Gma20g02037 1156 MobiDBLite consensus disorder prediction 363 382 - -
Gma20g02037 1156 MobiDBLite consensus disorder prediction 510 524 - -
Gma20g02037 1156 MobiDBLite consensus disorder prediction 1081 1098 - -
Gma20g02037 1156 MobiDBLite consensus disorder prediction 1101 1115 - -
Gma20g02037 1156 MobiDBLite consensus disorder prediction 187 316 - -
Gma20g02037 1156 MobiDBLite consensus disorder prediction 571 711 - -
Gma20g02037 1156 PANTHER UNCHARACTERIZED 1 1134 - -
Gma20g02037 1156 MobiDBLite consensus disorder prediction 646 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g02037 Gma-Chr20 47623506 47632754 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g02037 25 68 PHD Transcription Factor Family AT5G22260 44.681 3.61e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g02037 - - gmx:100799209 2169.81