Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g02012 ATGTTGCAGTTGCCAATGGTGGTGATTGGGCTTGTTGAGAATAGACTTAAGAGAGGGACAATAATGAAGGAAAGGGCGGTGACCTCTTCCGCTTTGATCTTCTTCTGTCCAGGCTGGTTACTTGGGTCAAAGATTTCTGGCATCTCTGTCATGGCAACTAGACTTCAGTTTGAGAATAATTGTGAAGTTGGAGTCTTCTCAAAACTTACCAATGCCTATTGTTTGGTTGCTATTGGAGGTTCCGAAAACTTCTACAGTGCATTTGAGGCTGAGTTAGCAGATGTTATCCCTGTGGTCAAGACCTCCATTGGTGGCACTCGTATTGTTGGTCGTCTTTGTGTTGGAAACAAGAACGGGCTTCTCTTGCCCCATACCATCACAGACCAAGAGCTTCAACATTTGAGAAACAGTCTACCTGATCAAGTTGTTGTTCAGCGTATAGAAGAAAGATTATCCGCTCTGGGAAATTGTATAGCATGTAATGACCATGTGGCCCTCACACACACTGATCTTGACAAGGAAACTGAGGAGATGATTGCAGATGTTCTGGGAGTAGAAGTTTTCAGGCAGACAGTTGCCGGTAATATTCTTGTGGGCAGTTACTGTGTATTCTCCAACAGAGGTGGTTTGGTCCACCCTCATACTTCCATCGAAGACTTGGATGAACTTTCTACACTTCTTCAGGTTCCTTTGGTTGCCGGGACTGTCAATCGTGGTAGCGAAGTAATAGCTGCTGGGATGACGGTAAATGATTGGACAGCATTTTGTGGTTCAGACACCACAGCAACAGAGCTCTCTGTGATTGAGAGTGTTTTCAAGCTGAGAGAAGCCCAACCCAGCGCCATTGTCGATGAGATGAGGAAATCACTCATTGATACTTATGTCTAA 888 0.4482 MLQLPMVVIGLVENRLKRGTIMKERAVTSSALIFFCPGWLLGSKISGISVMATRLQFENNCEVGVFSKLTNAYCLVAIGGSENFYSAFEAELADVIPVVKTSIGGTRIVGRLCVGNKNGLLLPHTITDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDKETEEMIADVLGVEVFRQTVAGNILVGSYCVFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELSVIESVFKLREAQPSAIVDEMRKSLIDTYV 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g02012 295 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 51 295 - -
Gma20g02012 295 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 51 295 IPR002769 GO:0042256|GO:0043022
Gma20g02012 295 CDD IF6 52 273 IPR002769 GO:0042256|GO:0043022
Gma20g02012 295 Gene3D - 51 275 - -
Gma20g02012 295 SMART eIF6neu2 53 254 IPR002769 GO:0042256|GO:0043022
Gma20g02012 295 SUPERFAMILY Pentein 51 274 - -
Gma20g02012 295 Hamap Translation initiation factor 6 [eif6]. 40 295 IPR002769 GO:0042256|GO:0043022
Gma20g02012 295 TIGRFAM eIF-6: putative translation initiation factor eIF-6 54 274 IPR002769 GO:0042256|GO:0043022
Gma20g02012 295 Pfam eIF-6 family 54 253 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g02012 Gma-Chr20 47351180 47357250 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g02012 51 295 Eukaryotic Initiation Factors Gene Family AT3G55620 91.429 8.22e-173 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g02012 K03264 - gmx:100777602 484.952