Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g02004 ATGTTGTACAAATCATCTGTGAGGCCTTTAAAGGTGGTCATGGCTAATTTGCTTACAGTGTTTTTGCTAATTGAGGTGTTTGCATATGGCTACAGTTACGGACAATATGGCTTAAACACGAATTACTACTTGATGAGCTCTTGTCCTTTTGTTGAACCTGTTGTTAAGAACATTGTCAACAGAGCTTTGCAGGATGATCCCACCCTAGCAGCTGGTCTGATTAGAATGCACTTTCACGACTGCTTCATTGAGGGATGCGATGGCTCTGTTCTGATTGACTCCACTAAGGATAATACAGCAGAAAAGGATTCTCCAGGGAATTTGAGCCTGAGAGGCTTTGAAGTCATAGATGCCATCAAAGAAGAGCTTGAAAGACAATGCCCTGGGGTGGTTTCATGCGCTGATATTCTTGCCATGGCTGCTAGAGATGCAGTTTTCTTTGCTGGAGGCCCAGTGTATGACATACCTAAAGGAAGAAAGGATGGAAGAAGATCCAAAATTGAGGATACTATCAATTTGCCATTCCCTACTTTCAATGCCTCTGAGCTCATTAAGTCGTTTGGTCAACGTGGTTTTTCTGCACAAGAGATGGTTGCCCTCTCTGGGGCTCATACACTAGGAGTGGCAAGGTGTGCTTCTTTCAAGAACCGATTGAAACAAGTGGATCCAACTTTGGATGCACAATTTGCCAAGACACTAGCGAGAACATGCAGTTCCGGCGACAACGCACCGCAGCCATTCGATGCCACGAGCAACGATTTTGACAACGTTTACTTCAACGCTTTGTTGAGGAGAAATGGGGTTCTTACATCAGACCAAACACTCTACAATAGCCCCAGAACCAGGAACTTTGTGAATGCTTATGCATTCAACCAAGCCATGTTCTTCTTTGATTTCCAACAAGCTATGGTCAAGATGGGCCTGCTTGATGTCAAAGACAATTCCAACGGTGAAGTAAGAGAAAATTGCCGCAAAATAAACTGA 984 0.439 MLYKSSVRPLKVVMANLLTVFLLIEVFAYGYSYGQYGLNTNYYLMSSCPFVEPVVKNIVNRALQDDPTLAAGLIRMHFHDCFIEGCDGSVLIDSTKDNTAEKDSPGNLSLRGFEVIDAIKEELERQCPGVVSCADILAMAARDAVFFAGGPVYDIPKGRKDGRRSKIEDTINLPFPTFNASELIKSFGQRGFSAQEMVALSGAHTLGVARCASFKNRLKQVDPTLDAQFAKTLARTCSSGDNAPQPFDATSNDFDNVYFNALLRRNGVLTSDQTLYNSPRTRNFVNAYAFNQAMFFFDFQQAMVKMGLLDVKDNSNGEVRENCRKIN 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g02004 327 ProSitePatterns Peroxidases active site signature. 70 81 IPR019794 GO:0004601
Gma20g02004 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 196 206 IPR019793 -
Gma20g02004 327 PRINTS Haem peroxidase superfamily signature 70 84 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma20g02004 327 PRINTS Haem peroxidase superfamily signature 131 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma20g02004 327 PRINTS Haem peroxidase superfamily signature 149 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma20g02004 327 PRINTS Haem peroxidase superfamily signature 196 211 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma20g02004 327 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma20g02004 327 PANTHER PEROXIDASE 47 32 325 - -
Gma20g02004 327 ProSiteProfiles Plant heme peroxidase family profile. 37 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma20g02004 327 SUPERFAMILY Heme-dependent peroxidases 40 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gma20g02004 327 PRINTS Plant peroxidase signature 48 67 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma20g02004 327 PRINTS Plant peroxidase signature 72 92 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma20g02004 327 PRINTS Plant peroxidase signature 111 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma20g02004 327 PRINTS Plant peroxidase signature 130 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma20g02004 327 PRINTS Plant peroxidase signature 149 164 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma20g02004 327 PRINTS Plant peroxidase signature 195 207 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma20g02004 327 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma20g02004 327 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma20g02004 327 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma20g02004 327 PANTHER PEROXIDASE 25-RELATED 32 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma20g02004 327 Coils Coil 326 327 - -
Gma20g02004 327 Pfam Peroxidase 55 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma20g02004 327 Gene3D - 42 327 - -
Gma20g02004 327 CDD secretory_peroxidase 37 326 IPR033905 GO:0004601|GO:0042744
Gma20g02004 327 Gene3D Peroxidase, domain 2 174 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g02004 Gma-Chr20 47299772 47302920 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g02004 11 327 Peroxidase AT4G33420 70.347 3.65e-165 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g02004 K00430 - gmx:100776019 648.277