Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01965 ATGGCTCGGGGGGATGGGAGCGTCGTCCCTACGGACCCGCAGACAATGGCGGTTGTGAAGAAGAAGACGCAGTCTTCGAGGAGTTGGATTCTGTTTGACGCCACAGGGCAAGGCTCCTTGCTCGACGTCGACAAATATGCCATCATGCATAGGGTTCATATTCATGCGCGTGATCTCAGAATCCTTGATCCCTTGCTCTCTTACCCCTCCACCATTCTCGGTCGTGAGAAGGCCATTGTTCTTAACTTGGAGCATATTAAGGCAATTATCACCGCTGAAGAGGTATTGCTGAGAGATCCAACAGATGAAAATGTGATCCCTGTTGTTGAGGAACTGCAAAGGCGGTTGCCTCAATTGAGTGCCACCGGTCTTCAACAGCAAGGAGATGGTAAAGAGTATCTTGGTGGCCAAAATGATGCTGAAGCCGCTGAAGAAGATGAGTCACCCTTTGAATTCCGGGCCCTGGAGGTTGCTTTAGAAGCCATTTGTAGTTTTCTTGCTGCACGTACAACAGAATTGGAGATGGCTGCTTATCCTGCATTAGATGAACTTACTTCCAAGATTAGTAGTCGTAATTTGGACAGAGTTCGTAAACTGAAGAGTGCAATGACAAGGCTGACTGCTAGGGTTCAAAAGGTCAGAGATGAGCTTGAACAATTGCTGGATGATGATGATGATATGGCTGACCTGTACCTGTCAAGAAAGGCTGGTTCAGCATCACCAGTTAGTGGATCAGGTGCTGCAAATTGGTTTGCTGCCTCCCCCACCATAGGATCAAAGATATCTAGAGCAAGTAGAGCAAGTTTAGCAACAGTTCGTTTAGATGAAAATGATGTGGAAGAGCTTGAAATGTTACTTGAGGCTTATTTCAGTGAAATCGACCACACATTGAACAAATTAACCACActgcgagagtacattgatgatactgaagattatattaatattcaaCTTGACAACCATCGTAATCAGCTGATTCAGTTAGAGCTCTTTCTTAGCTCTGGAACTGTTTGTCTATCTTTCTACTCTTTGGTGGCGGCTATATTTGGCATGAATATCCCATATACTTGGAACGAAAACCATGGTTACATGTTCAAATGGGTAGTTATTGTCTCGGGAGTATTTTCTGCTGTGATGTTTCTCATGATTACAGCCTATGCTCGCAAAAAGGGGTTAGTAGGATCGTGA 1188 0.436 MARGDGSVVPTDPQTMAVVKKKTQSSRSWILFDATGQGSLLDVDKYAIMHRVHIHARDLRILDPLLSYPSTILGREKAIVLNLEHIKAIITAEEVLLRDPTDENVIPVVEELQRRLPQLSATGLQQQGDGKEYLGGQNDAEAAEEDESPFEFRALEVALEAICSFLAARTTELEMAAYPALDELTSKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKAGSASPVSGSGAANWFAASPTIGSKISRASRASLATVRLDENDVEELEMLLEAYFSEIDHTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSFYSLVAAIFGMNIPYTWNENHGYMFKWVVIVSGVFSAVMFLMITAYARKKGLVGS 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01965 395 MobiDBLite consensus disorder prediction 120 142 - -
Gma20g01965 395 Gene3D - 14 100 - -
Gma20g01965 395 PANTHER MAGNESIUM TRANSPORTER MRS2-I 5 395 - -
Gma20g01965 395 Pfam CorA-like Mg2+ transporter protein 268 383 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Gma20g01965 395 CDD Mrs2_Mfm1p-like 29 392 IPR039204 -
Gma20g01965 395 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 5 395 IPR039204 -
Gma20g01965 395 Gene3D Magnesium transport protein CorA, transmembrane region 107 325 - -
Gma20g01965 395 Coils Coil 196 223 - -
Gma20g01965 395 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 331 383 IPR045863 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01965 Gma-Chr20 46890724 46895569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01965 5 368 MRS2 Gene Family AT5G64560 81.370 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01965 K16075 - gmx:100810239 739.184