Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01941 ATGGGATTCTATCTTAATCTCAAACGCAACGCGTTCCGGCTAAAACGGTTTCTGCTAGGACATGAAGGCAGAAAAAGAAAATACAAACAGCCAAAAAAGCCTTCATGGATGAGGCCAATGGCATATGGTTATCAAGTGGTGGAGCATAACATGGCCAGAGATGGTTCTGATGATTCAGTTGTGGCACAGAGAGAGGAAATGGATCAAACAGAATTATGGTATTTTGGAATCTTTGACGCACTAATTGGAGACAAAGTTACCAAGTACATGCAGTCTTATTTCTTTGACAAGAAGCTTCAAGAGACTCATATAAGGAGAAAAAGCAAGGAAGCTCTAAAGAGAGCTTACCTTGGTGTAAGAGCAACGATCCGAGAGGAACACAAATTAGAGGAGACATGCAGAATGGGTTCAGCATCTGTTATGTTGATCAACGGAGAAAAACTTGTGGTAGCCAACATGGGAGATTACAGAACTGTTGTCTGCAGAGATGGCATAGCTCATCAGACAACTGGCACAAACCAACGATCAACGAAAATACATTGGTCTCGCAGACTCTTTGCAGCATGTCAATCAGGAAATGCAGCAGGTGCAAAGCATTCTAGAGGTTCTGCTCTTGTCATTAGAAGTGAAAGGATCGATTCTGATACTGAGTTTTTGATATTAGCAAGCACTGGCATATGGGAGGTGATGCAAAACCAAGAGGCCGTGAATCTGATCAGTCACATAGAGGATCCACAAGAAGCAGCTGAATGCTTGGCAAAGGAAGCTCTAATTAGGATGAGCAAAAGCAGCATCTCATGCTTAATCATTCGCTTTGATTGA 822 0.4234 MGFYLNLKRNAFRLKRFLLGHEGRKRKYKQPKKPSWMRPMAYGYQVVEHNMARDGSDDSVVAQREEMDQTELWYFGIFDALIGDKVTKYMQSYFFDKKLQETHIRRKSKEALKRAYLGVRATIREEHKLEETCRMGSASVMLINGEKLVVANMGDYRTVVCRDGIAHQTTGTNQRSTKIHWSRRLFAACQSGNAAGAKHSRGSALVIRSERIDSDTEFLILASTGIWEVMQNQEAVNLISHIEDPQEAAECLAKEALIRMSKSSISCLIIRFD 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01941 273 CDD PP2Cc 42 272 IPR001932 -
Gma20g01941 273 PANTHER ALPHABET, ISOFORM E-RELATED 5 272 - -
Gma20g01941 273 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 5 272 - -
Gma20g01941 273 SUPERFAMILY PP2C-like 34 273 IPR036457 -
Gma20g01941 273 Gene3D - 40 273 IPR036457 -
Gma20g01941 273 ProSiteProfiles PPM-type phosphatase domain profile. 53 272 IPR001932 -
Gma20g01941 273 SMART PP2C_4 30 270 IPR001932 -
Gma20g01941 273 Pfam Protein phosphatase 2C 44 170 IPR001932 -
Gma20g01941 273 Pfam Protein phosphatase 2C 209 263 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01941 Gma-Chr20 46688861 46690784 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01941 1 272 PP2C-type Phosphatase Gene Family AT3G23360 47.464 9.90e-84 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01941 K19704 - gmx:100780639 543.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g01941 20 46688861 46690784 Gma20g01941 20 46688861 46690784 ECH
Gma10g01773 10 44953185 44958404 Gma20g01941 20 46688861 46690784 GST