Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01936 ATGGCTCCCACCCCTTCTTCGAAACAAAACCACCCCACTCAATTGAAGACTCCACAGTCCAAGCACCGTCTCAACTTCAATGGCCTCAAATCAGCACCTTCTCCGAACCCTAATTCTGTTGCAAACAAGGAACCCCCACCTGAACACCCAATTGAAGTCATTGCCAGAATCCGTGACTACCCAGATCGAAAGGACAAGCCTTTGTCCGTTCTTCAAACCAATTCCAACTCTAGTTCCATTCGGGTTCGTGCCGATTTTGGGTACCGGGACTTCACCCTTGATGGGGTATCCGTGTCTGAGGAGGAGGACTTGGATGTGTTCTATAAGAAGTTTGTTGAGTCAAGGATCCATGGGGTTAAGCTGGGGGACAAGTGCACCATCATGATGTATGGGCCAACTGGTTCTGGGAAGAGTCACACCATGTTCGGGTCGTCGAAGCAGGCAGGGATTGTGTATAGGTCTCTGAGGGACATTCTTGGAGATGGGGATAGTGCAGATGGAGATTCTGGGGGTGGGTTGGGGACTTTTGTTCAAGTCACTGTTTTGGAGATTTACAATGAGGAGATTTATGATCTCTTGTCCACCAATGGAGGAGGTGGGGGAGGAGGATTTGGATTTGGCTGGCCTAAGGGGGGTAGTGCTTCAAAGGTGAAACTTGAAGTGATGGGGAAAAAGGCAAAGAATGCAACCTATATATCTGGAAATGAAGCAGGGAAGATCTCAAAAGAAATTCAGAAAGTGGAGAAGCGAAGGATTGTTAAAAGCACACTTTGTAATGACAGAAGTTCCAGAAGTCACTGCATGgtaatccttgatgttccaactgtgggagggcggctaatgcttgtagacatggcaggatcagaaaatattgaacaagccggtcaaactggatttgaggccaaaatgcagactgcaaaaatcaatcaaggaaatatagcgctgaagagagtggtggagtccattgcaaatggcgattcacatgtgccttttagggacagcaaacttaccatgcttctgcagGATTCCTTTGAAGATGATAAGTCAAAAATTCTAATGATACTATGTGCAAGTCCTGATCCTAAGGAGATACACAAGACAATCTCTACACTTGAATATGGGGCAAAAGCAAAATGCATAGTCCGTGGACCTCATACTCCAGTCAAGGATGATGAATCTTCTTCAGCTGTCATTTTGGGATCAAGAATTGCTGCAATGGATGAATTTATCTTGAAGCTACAAATGGAAACCAAGCAAAGAGAGAAAGAACGGAACGAAGCCCACAAAAAGCTTTTGAAGAAAGAAGAAGAAATTGCTGCGTTAAGAGCTAAGCTGGACATGGCAGAAGGCAAAGGAACTCCTCCAAGCGAGGAGGAAATTAACCTGAAGGTAAATGAACGAACCCGGCTTCTGAGACAAGAGTTGGAAAAGAAGTTGGAAGAGTGCCAAAGAATGACTAATGAATTTGTTGAATTGGAGAGGAAGAGAATGGAAGAGAGGATACTGCAGCAGCAGGAGGAAGTTGAAACTCTGAGAAGGAGACTGGAAGAGATTGAGTTGCAGCTGTGTTCAAAGCAAGGGTGTTGTGTGGAAAATGAGTCAAAAGACATGGAGTCGAGTGGGTTTATGAGAAGGTTATTGCGTGTTTACAAAAGTGAGGATGATCCTGGAATGGTGAAGTCAATGGATTTGGACATGGATGATCAAGAACCCCTTGGCCACGAGGTAAATATCGTTGGTGGAGTTATGAGCAGGAGTGATTACAATGTTAAGCAGGACTTATCAAATCAACCTTGTCCGAATGCTTTGACTGGTGTAAAAGAAGATGCTCATGTTTTTTCACCAAACTTTGGCCAAAGGGTGTGCCTTAGTACAGTATATGAGGAAGAAGGAGAAGGAGATGAAGACAAAGGGGAAGATGAGGAAGTGGAGAAAGGAGTGATAGAGGAAAAGAGGGTATGTAGTGTTGACAAGCCTAGTGCTGCAGGTTCCTTGGGAACCTTAAACCTGTCTAACACAAGTCCAAACAAAGAGGAATTTTGTTTCAAGGTAAGTTCAGTGGATAATGACTCTAGACTCCTGAGAATTCAAAATATATTCACTCTGTGTGGCAACCAAAGAGAGCTCTCCCAGCACATTGGAACCCCAGTACAACCTACAAAAAAGAGGTCTGATGAAACTTTTGAGGTTTCTCCTGCCAAGACAAGTGACAAGGATTCCGTTTTCAAAATTTCCAACAAGGAGAACTTTGAACCACATAATGTTCTAGGAAATTAG 2277 0.3979 MAPTPSSKQNHPTQLKTPQSKHRLNFNGLKSAPSPNPNSVANKEPPPEHPIEVIARIRDYPDRKDKPLSVLQTNSNSSSIRVRADFGYRDFTLDGVSVSEEEDLDVFYKKFVESRIHGVKLGDKCTIMMYGPTGSGKSHTMFGSSKQAGIVYRSLRDILGDGDSADGDSGGGLGTFVQVTVLEIYNEEIYDLLSTNGGGGGGGFGFGWPKGGSASKVKLEVMGKKAKNATYISGNEAGKISKEIQKVEKRRIVKSTLCNDRSSRSHCMVILDVPTVGGRLMLVDMAGSENIEQAGQTGFEAKMQTAKINQGNIALKRVVESIANGDSHVPFRDSKLTMLLQDSFEDDKSKILMILCASPDPKEIHKTISTLEYGAKAKCIVRGPHTPVKDDESSSAVILGSRIAAMDEFILKLQMETKQREKERNEAHKKLLKKEEEIAALRAKLDMAEGKGTPPSEEEINLKVNERTRLLRQELEKKLEECQRMTNEFVELERKRMEERILQQQEEVETLRRRLEEIELQLCSKQGCCVENESKDMESSGFMRRLLRVYKSEDDPGMVKSMDLDMDDQEPLGHEVNIVGGVMSRSDYNVKQDLSNQPCPNALTGVKEDAHVFSPNFGQRVCLSTVYEEEGEGDEDKGEDEEVEKGVIEEKRVCSVDKPSAAGSLGTLNLSNTSPNKEEFCFKVSSVDNDSRLLRIQNIFTLCGNQRELSQHIGTPVQPTKKRSDETFEVSPAKTSDKDSVFKISNKENFEPHNVLGN 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01936 758 PRINTS Kinesin heavy chain signature 122 143 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma20g01936 758 PRINTS Kinesin heavy chain signature 256 273 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma20g01936 758 PRINTS Kinesin heavy chain signature 279 297 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma20g01936 758 PRINTS Kinesin heavy chain signature 329 350 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma20g01936 758 PANTHER KINESIN-RELATED 17 718 IPR027640 GO:0003777|GO:0007018
Gma20g01936 758 MobiDBLite consensus disorder prediction 1 38 - -
Gma20g01936 758 PANTHER KINESIN-LIKE PROTEIN KIF22 17 718 - -
Gma20g01936 758 Gene3D Kinesin motor domain 30 383 IPR036961 -
Gma20g01936 758 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 387 IPR027417 -
Gma20g01936 758 SMART kinesin_4 48 388 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma20g01936 758 ProSiteProfiles Kinesin motor domain profile. 50 380 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma20g01936 758 Coils Coil 415 451 - -
Gma20g01936 758 MobiDBLite consensus disorder prediction 713 744 - -
Gma20g01936 758 Coils Coil 465 521 - -
Gma20g01936 758 MobiDBLite consensus disorder prediction 1 49 - -
Gma20g01936 758 Pfam Kinesin motor domain 72 380 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01936 Gma-Chr20 46667810 46671111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01936 105 392 Calmodulin-binding Proteins AT5G65930 27.723 4.23e-25 110
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g01936 20 46667810 46671111 Gma20g01936 20 46667810 46671111 ECH
Gma10g01777 10 44971763 44974988 Gma20g01936 20 46667810 46671111 GST