Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01925 ATGAATTCAGAGAAGTCAGTGAGTCTTGATATTTCAAGTGAAGAAAATGATCATCATGATCAAGATGATGACACTGGTGGAACCAAACGGTCTTATGAGTGCACATTCTGCAAAAGAGGCTTCACAAATGCTCAGGCTTTAGGGGGGCATATGAATATCCATAGGAAGGACAGGGCCAAGGCCAAGCAATTCACAATTGATGCTTCACCTTCAGTTAACAAATTCAACAACGATGATTCCACGGCCCTTCCTTTTGTCTCAGAAATTATGAATCAACCCACAAAGCCTAATTACTACTCCCTTTTGGAGTCTCAGATGAACTTTCAACCACCACATGCCTTTTATTATGAGTTTTGTAACTCAAGGTCTCAGCCTTTGAGTTTGAACCAAGGGCTTCATGGTGCCAATTTGAGTCTCCAAATTGGTCCGAGTCATGTTGATGATAACATTCATCAATTCAGGAGAGGAAATCAGAAAACGAGTGAAGTGGACTTGGAGCTCAGACTTGGCCATGATCCATACTGA 525 0.4171 MNSEKSVSLDISSEENDHHDQDDDTGGTKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQFTIDASPSVNKFNNDDSTALPFVSEIMNQPTKPNYYSLLESQMNFQPPHAFYYEFCNSRSQPLSLNQGLHGANLSLQIGPSHVDDNIHQFRRGNQKTSEVDLELRLGHDPY 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01925 174 SUPERFAMILY beta-beta-alpha zinc fingers 29 58 IPR036236 -
Gma20g01925 174 Gene3D Classic Zinc Finger 6 85 - -
Gma20g01925 174 PANTHER TRANSCRIPTIONAL REGULATOR TAC1-LIKE 6 173 - -
Gma20g01925 174 ProSiteProfiles Zinc finger C2H2 type domain profile. 32 59 IPR013087 -
Gma20g01925 174 Pfam C2H2-type zinc finger 32 56 - -
Gma20g01925 174 PANTHER OS07G0101800 PROTEIN 6 173 - -
Gma20g01925 174 MobiDBLite consensus disorder prediction 10 29 - -
Gma20g01925 174 ProSitePatterns Zinc finger C2H2 type domain signature. 34 54 IPR013087 -
Gma20g01925 174 MobiDBLite consensus disorder prediction 1 29 - -
Gma20g01925 174 SMART c2h2final6 32 54 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01925 Gma-Chr20 46526738 46527262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01925 23 90 C2H2 Transcription Factor Family AT3G09290 51.471 6.86e-17 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma20g01925 zf-C2H2_6 1.7e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01925 - - gmx:102665558 348.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01794 10 45149417 45149944 Gma20g01925 20 46526738 46527262 GST