Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01905 ATGGATTATAAAAATCTTAGTCTTCTTGTGCTATATATAACAACACAACTCACCCTCTCTTCATTCCCTACACAACACTCTCTCTCCTCCTTCCACCTAGCAGTGGTGACAACCAAACCAAGTGTCCCCTCCTTTCTCTTGTTAACAGGTAGCAGAggttttggaatcCTGGCTGGTGGAATAGTTGCCTTGATTGTGTCATCTGCATATGACCACAAATATGATCTTCCTAGTTACAAAGACAATCCAGCAGctgctgcaggaaaggcaggagctattgttggtgcatttggGTTCTTGTATGCTGCACAAAGTACGAACCCCGATAAAGTTGATCATGGTTACCCAACTGGTATTGGGGTTAAAAACTCCCTCATTGTGCTTGGTGTGATCAACTTCTTTGGAATGGTATTCACCTTGTTAGTGCCAGAATCAAAGGGAAAATCACTGGAAGAGTTGAGTGGGGAGAATGAAGATGATGGTGCTGAGGCTATAGAGATGGCAGGGTCTGCTAGGACGGTTCCAGTTTAA 531 0.3917 MDYKNLSLLVLYITTQLTLSSFPTQHSLSSFHLAVVTTKPSVPSFLLLTGSRGFGILAGGIVALIVSSAYDHKYDLPSYKDNPAAAAGKAGAIVGAFGFLYAAQSTNPDKVDHGYPTGIGVKNSLIVLGVINFFGMVFTLLVPESKGKSLEELSGENEDDGAEAIEMAGSARTVPV 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01905 176 PANTHER HIGH AFFINITY INORGANIC PHOSPHATE TRANSPORTER 84 169 - -
Gma20g01905 176 PANTHER HIGH AFFINITY INORGANIC PHOSPHATE TRANSPORTER 51 76 - -
Gma20g01905 176 Gene3D MFS general substrate transporter like domains 82 169 IPR036259 -
Gma20g01905 176 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 84 169 - -
Gma20g01905 176 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 51 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01905 Gma-Chr20 46359724 46364281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01905 52 83 Inorganic Solute Cotransporters AT2G32830 62.500 1.75e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01905 K08176 - gmx:100792177 177.948