Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01902 ATGGAGGAGCACCAGAAGGCTGGGAAGCTGCAGGGAAAGGAAGAGGTGCGGTACCGCGGCGTGCGGCGGCGGCCGTGGGGAAAGTACGCGGCGGAGATAAGGGATCCATCGAAGCAAGGGTCAAGGCTGTGGTTGGGGACATTTGACACTGCTGAAGAAGCTGCTAGAGCTTATGACCGTGCAGCTTTTAACCTAAGGGGCCATCTTGCGATTCTCAATTTTCCTAGTGAGTACTATTCTCAGATAAGGGGTTCACCACCATATCCACCTCATTTAGCAACACCATCTTCCTCTTCTGGTGCACAACAGAGGCCTGTTTTTGAGATTCCGTGTTTGGATGATAAGGTGTTGGAGGATCTTCTTGGTCAGTCAGAGGAACACAAGAAGAAAAACAAGGGAGATTAA 405 0.5086 MEEHQKAGKLQGKEEVRYRGVRRRPWGKYAAEIRDPSKQGSRLWLGTFDTAEEAARAYDRAAFNLRGHLAILNFPSEYYSQIRGSPPYPPHLATPSSSSGAQQRPVFEIPCLDDKVLEDLLGQSEEHKKKNKGD 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01902 134 Gene3D AP2/ERF domain 16 76 IPR036955 GO:0003700|GO:0006355
Gma20g01902 134 SUPERFAMILY DNA-binding domain 17 76 IPR016177 GO:0003677
Gma20g01902 134 CDD AP2 17 75 IPR001471 GO:0003700|GO:0006355
Gma20g01902 134 Pfam AP2 domain 17 68 IPR001471 GO:0003700|GO:0006355
Gma20g01902 134 PANTHER ETHYLENE RESPONSE FACTOR 1 125 - -
Gma20g01902 134 SMART rav1_2 17 81 IPR001471 GO:0003700|GO:0006355
Gma20g01902 134 ProSiteProfiles AP2/ERF domain profile. 17 75 IPR001471 GO:0003700|GO:0006355
Gma20g01902 134 PRINTS Ethylene responsive element binding protein signature 18 29 IPR001471 GO:0003700|GO:0006355
Gma20g01902 134 PRINTS Ethylene responsive element binding protein signature 41 57 IPR001471 GO:0003700|GO:0006355
Gma20g01902 134 MobiDBLite consensus disorder prediction 83 105 - -
Gma20g01902 134 PANTHER DNA-BINDING DOMAIN 1 125 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01902 Gma-Chr20 46309490 46309894 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01902 15 129 AP2-EREBP Transcription Factor Family AT3G23230 62.903 1.08e-47 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma20g01902 AP2 4.7e-17 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01902 - - gmx:100776376 271.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01814 10 45401044 45401840 Gma20g01902 20 46309490 46309894 GST