Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01874 ATGGAGCGTTTAGAGAACGTGATTTCAGACACAATCCTCTACGATCCCTCCAACATAGGGTTAGGTTCCTTGGTGGACACTCTCCTCTCCGACTTGGACCAAACCATGTCGTTACCCTCACACTACCATCTCTCATCAGACCTTCCCGATTTCGCCACCACCGTGGAAGAACACTCCGGGATACGACTCATTCACACGCTGATGACGTGTGCGGATTCCCTGCAACGTGGCCACTTCTCATTCGCTGCCTCCCTCATCCAGAACATGCAAGGCTTGTTGGCGCACGTCAACACCAACTGCGGCATCGGAAAAGTCGCCGCCTGCTTCATCGACGCCTTGCGCCGCCGCATCTCCAACAAGTTTCCAGCATCATCCGCTTACGAGAACGACGTTCTCTACCACAACTACTACGAGGCGTGTCCTTACTTGAAGTTCGCGCACTTCACCGCGAACCAGGCGATCTTGGAGGCCTTCAACGGCCACGATTGCGTCCACGTCATCGACTTCAACCTCATGCAGGGGCTCCAGTGGCCAGCGCTGATACAGGCGCTGGCGCTCCGGCCCGGAGGACCGCCGCTGCTGAGGCTCACCGGCATCGGGCCCCCCTCGGCGGAAAACCGCGACAACCTCCGCGAAATCGGGCTGAGACTCGCCGAGCTGGCGCGCTCCGTGAACGTGCGGTTTGCGTTCCGCGGCGTGGCGGCGTGGCGGCTGGAGGACGTGAAGCCGTGGATGTTACAGGTGAGTCCGAACGAAGCAGTAGCGGTGAACTCGATCATGCAGCTGCACCGGCTGACGGCGGTGAAGTCCGCCGTTGAAGAGGTTCTGGGATGGATCCGGATTCTGAACCCTAAAATCGTGACGGTTGTGGAACAAGAAGCCAACCACAACGGGGAAGGGTTTTTGGAGCGGTTCACGGAGGCTTTGCATTACTATTCCAGCGTTTTCGACTCGCTCGACGCGTGTCCGGTCGAACCGGACAAGGCTGCTTTGGCGGAGATGTATCTGCAGAGGGAGATATGCAACGTGGTGTGCTGCGAGGGACCGGCGCGGCTGGAGCGCCACGAGCCGCTCGCTAAGTGGAGGGATCGGCTGGGGAAAGCCGGCTTCAGAGCCTTGCATTTGGGTTTCAACGCCTACAAGCAAGCCAGCATGTTGCTCACTCTCTTCTCAGCTGAGGGTTTCTGCGTCCAAGAGAATCAAGGCTCTTTGACTCTGGGTTGGCATAGCCGCCCCCTAATTGCAGCTTCGGCTTGGCAAGCCGCGCCTCTGGGAGACGACGAAACGCTGCGTTTTGAGCATTGA 1305 0.5862 MERLENVISDTILYDPSNIGLGSLVDTLLSDLDQTMSLPSHYHLSSDLPDFATTVEEHSGIRLIHTLMTCADSLQRGHFSFAASLIQNMQGLLAHVNTNCGIGKVAACFIDALRRRISNKFPASSAYENDVLYHNYYEACPYLKFAHFTANQAILEAFNGHDCVHVIDFNLMQGLQWPALIQALALRPGGPPLLRLTGIGPPSAENRDNLREIGLRLAELARSVNVRFAFRGVAAWRLEDVKPWMLQVSPNEAVAVNSIMQLHRLTAVKSAVEEVLGWIRILNPKIVTVVEQEANHNGEGFLERFTEALHYYSSVFDSLDACPVEPDKAALAEMYLQREICNVVCCEGPARLERHEPLAKWRDRLGKAGFRALHLGFNAYKQASMLLTLFSAEGFCVQENQGSLTLGWHSRPLIAASAWQAAPLGDDETLRFEH 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01874 434 Pfam GRAS domain family 63 420 IPR005202 -
Gma20g01874 434 ProSiteProfiles GRAS family profile. 54 420 IPR005202 -
Gma20g01874 434 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 46 424 IPR005202 -
Gma20g01874 434 PANTHER OS05G0574900 PROTEIN 46 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01874 Gma-Chr20 46043338 46045283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01874 57 420 GRAS Transcription Factor Family AT1G14920 53.784 1.38e-139 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma20g01874 GRAS 1e-122 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01874 K14494 - gmx:100785293 859.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01844 10 45706558 45708196 Gma20g01874 20 46043338 46045283 GST