Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01841 ATGAGCAATGAGGATCACGGTGTTTCAGGCAAGCAATATATAGATGCGGTGAGTGTTGGTTTAAGTGACAGAATCCCTTCTGATGATGATGCAGACTATATATGTCTACAGACGGGTGAAGAATTTTCTGCCGAGTTCTTACGTGATCGGGTTGCCTCAAGGAAATTTCCTGTCATTACTGATGCAGACCAGCATCTGCCAAACAGGTTGGATGCTAATATTAGAGAAAATAGTCCTCAACTGGTTTATGAGGATCTAAAGCATGTTCTTGGGCTAAGGAGAACAGAATCTGATAGTAACTCAGATTTGTTGGAGATTGCTTCAGTCAGAGGATATGTTGATGAAGTTGACAGCAGGGCTTATCCTAATAATTTGAACAGATACCAGTGTGAACACAGCGGtttcagacaagcatcaggtacattttctagacaactgtcaggtaaattttctGAGGGAAATGGTTGTGATCAAGTTAATTCAGGACCCAATGCTCCATCTGTTTACGTCGTTGAGTCTCCTCATTCATGCCATCCTTATGGATCAGTATTCTCAGAAGGTTCTTTCTATAAGAAGATAAAGTTTCTGTGTAGCTTTGGAGGTAGAATACTACCAAGACCAAATGACGGGAAGCTCAGGTATGTGGGTGGAGAGACACGGATAATATCAATCAGGAAGAACATAAAATGGGAGGAACTTATGAGGAAGACTTCTGCTATTTGCAGTCAAACTCACATTATCAAGTACCAGCTTCCTGGAGAAGATCTTGatgctcttatatctgtttgttccaatgaggatcttcatcatatgatcgaggaatatgaagagcttgaaagagctggaggctctcaatggctgaggatttttctcataccttcaaatgaatgtgagagtccaagttcaaatgaagcaagagtcaatcagccaagtgatgcagattatcattatgttgttgctgttaatggtatgctgaatccaagtccacaaaagaattccaatgggctgagtttggcaaaccatactagtcagtttggaaATACCACTGATTACAACAGTCCACATTTCTATAGAGACTCATCCACATCTGCATTTGCTTCAGAGATGAAGGATTGCACCCCAACTTCTCCAAATTTGGTAGGCATACTCTCAAAACCTGGTTCTCAATATTTTACAGCCTTAGCAGGCAAGTCAGTCAATCAAATGTCTCCTTTATCTCCCGCTTGTGTACAGCCTACAGATCCCAAAATTTCTAATGTACAGATATTTAAGGATAAACCATATAATGCTATCAATGAAAGCATCACTCCCTTTGTTACGGAAAAAGTTCCATGCAACAATTCTTTGTATGTAGACAATACCAATTATATTGATCCAGTTGCATACCATAATAACCAATATATAGTGAAATCTGACCTGATCAGGAAACCTGGCAAGAATCTTCATCTTCACAGACGGAACAACAGCAGTAATGAGTTTGTCTCTTCTACGGCATGTAGTCTAACTGACTTGATTTTCGAGAGACCTTTAGTCACCAATGAAGGTTCATATCATTTTAACAAGGTTGTCTCTCGTCCTCATGAGTCGTCGAGTTTATTCTCAGAGTCTGATGTTAGAGAGGGGTCTCGGTACAGAATGTTGCATGCACATTCTGACTCAACACTTAAGGAGAATGATGAGAACTATAAAGTTCACTTGCAATTTCCCCTTAGCGTAGAGAGAGACAATTTTCCATCATTGAAAAATTCATGTTCTTTAGAAGAATGTTCAATACAGCCTGGAAAGACAATTGATAGGAAAGAACACTCAGCAAAGTATCAAAATTTGCCCATTTTTGGAATGACGGATAGTTTTAATGTGTCAGAAAAGGGTAAAGAGATCTTGCAACATGCAGATAACAGCAATGATTTCTTTAATGAAAATGTTGGAGCTATGTCACAAGACAATTCCATAGATTTAAAACATTTACAGTACATTTACACCCCACATGGTGTTTGCTCTTCTTCACCAGATTTCCAAAGCAGTGAATGCAATTTATCTACTGCATCATCTATCTCTTTGGAATCCACAAGAAACCTGAGGGGGCAACCACATGGTCTATCATTAGACAGAACTGCTTCTGAGTTTTCCACGAGGAGCCAAAATTCATCAATGCATCACCAATATGCTATGCCGGAGACAAAAGACGGTCAACCACTTTTTCCTGGCTCTTTTGAGTCCCAAACTGAGAGAGGGTCTATACTACCTATCTCATATATGGACATGGGTTCTTCCCTAAGAGAGGTTGTTATCCCTGTTGAAGATCCTGCATACAACCTGCACCAAAAGGAACAAAACACAGTCATTAAGAATCAGTGTTCTGAATATATCAATGAATTCTGTGTCAACAAGCCTGTGCCAGAATCAGTGGCTGTTGTCAAGGGAGCAATGGATTATATTTCTTCAGGTATCCAGTCATGCCTAAAAGATGTCTCAAATGTAGATGAAGAGGCTGAAGTTGAACCTACATCTCCTGAAAAGGAAGGGATAGAATGTGATAATCCAGAATCTGAAAGTAAGCATGCAGAATCTGATAGTGGAAACGTCAACAAACCTATGGGTGATAGAGCAACTGCTGAAACAGAGGCTGAAGTTTATGGTTTACAGaatattgagaatgctgatcttgaagaattgcaagagttaggatctggaacatttggaactgtttatcatggaaagtggaggggaacagatgttgcaattaagagaataaaaagtagttgtttctctggtagattgtcagagcaagagcggttgACTAAAGATTTTTGGAGAGAGGCACAGATTCTGTCAACTCTTCACCATCCAAATGTGGTAGCATTTTATGGGGTAGTTCCAGATGGCCCAGGTGGAACATTGGCAACAGTAACCGAATACATGGTGCATGGATCACTGAGGAATGTTCTCACGAAGAAGGATAGAGTGCTTGACCGTCGTAAAAGGCTCCTGATTGCAATGGATGCAGCCTTTGGGATGGAATATTTGCATTTGAAAAATATTGTTCATTTTGATTTGAAGTGTGATAATTTACTTGTCAATCTGGGCGATCTTGAACGACCTGTATGTAAGgttggagattttggcctatcccgaattaaacgcaacacacttgtttccggtggtgttagaggaacccttccatggatggcacctgagttactggatggtaacagttgtagggtatctgagaaggttgatattttctcatttggcattgcaatgtgggaaatcttgaccggggaagaaccatattctaacatgcactgtggcgctatcataggtggtattgtcaataatacgctcaggcctccgattccaaaacgatgcgattccgagtggaaaaagctgatggaagaatgctggagtcccgatcctgcagccaggccaaccttcacagaaattacaaacaggctTCGCAGCATGTCAGATTCACTGCCCAAAAAGAGACATAACATTGTAAAACGATGA 3510 0.3077 MSNEDHGVSGKQYIDAVSVGLSDRIPSDDDADYICLQTGEEFSAEFLRDRVASRKFPVITDADQHLPNRLDANIRENSPQLVYEDLKHVLGLRRTESDSNSDLLEIASVRGYVDEVDSRAYPNNLNRYQCEHSGFRQASGTFSRQLSGKFSEGNGCDQVNSGPNAPSVYVVESPHSCHPYGSVFSEGSFYKKIKFLCSFGGRILPRPNDGKLRYVGGETRIISIRKNIKWEELMRKTSAICSQTHIIKYQLPGEDLDALISVCSNEDLHHMIEEYEELERAGGSQWLRIFLIPSNECESPSSNEARVNQPSDADYHYVVAVNGMLNPSPQKNSNGLSLANHTSQFGNTTDYNSPHFYRDSSTSAFASEMKDCTPTSPNLVGILSKPGSQYFTALAGKSVNQMSPLSPACVQPTDPKISNVQIFKDKPYNAINESITPFVTEKVPCNNSLYVDNTNYIDPVAYHNNQYIVKSDLIRKPGKNLHLHRRNNSSNEFVSSTACSLTDLIFERPLVTNEGSYHFNKVVSRPHESSSLFSESDVREGSRYRMLHAHSDSTLKENDENYKVHLQFPLSVERDNFPSLKNSCSLEECSIQPGKTIDRKEHSAKYQNLPIFGMTDSFNVSEKGKEILQHADNSNDFFNENVGAMSQDNSIDLKHLQYIYTPHGVCSSSPDFQSSECNLSTASSISLESTRNLRGQPHGLSLDRTASEFSTRSQNSSMHHQYAMPETKDGQPLFPGSFESQTERGSILPISYMDMGSSLREVVIPVEDPAYNLHQKEQNTVIKNQCSEYINEFCVNKPVPESVAVVKGAMDYISSGIQSCLKDVSNVDEEAEVEPTSPEKEGIECDNPESESKHAESDSGNVNKPMGDRATAETEAEVYGLQNIENADLEELQELGSGTFGTVYHGKWRGTDVAIKRIKSSCFSGRLSEQERLTKDFWREAQILSTLHHPNVVAFYGVVPDGPGGTLATVTEYMVHGSLRNVLTKKDRVLDRRKRLLIAMDAAFGMEYLHLKNIVHFDLKCDNLLVNLGDLERPVCKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLDGNSCRVSEKVDIFSFGIAMWEILTGEEPYSNMHCGAIIGGIVNNTLRPPIPKRCDSEWKKLMEECWSPDPAARPTFTEITNRLRSMSDSLPKKRHNIVKR 1169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01841 1169 MobiDBLite consensus disorder prediction 836 858 - -
Gma20g01841 1169 Gene3D Transferase(Phosphotransferase) domain 1 977 1168 - -
Gma20g01841 1169 ProSiteProfiles Protein kinase domain profile. 889 1167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g01841 1169 SMART PB1_new 207 294 IPR000270 GO:0005515
Gma20g01841 1169 MobiDBLite consensus disorder prediction 706 722 - -
Gma20g01841 1169 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1014 1026 IPR008271 GO:0004672|GO:0006468
Gma20g01841 1169 Gene3D - 211 294 - -
Gma20g01841 1169 CDD PB1_UP2 196 292 - -
Gma20g01841 1169 PANTHER SERINE-THREONINE PROTEIN KINASE 102 1166 - -
Gma20g01841 1169 ProSitePatterns Protein kinases ATP-binding region signature. 895 916 IPR017441 GO:0005524
Gma20g01841 1169 MobiDBLite consensus disorder prediction 825 870 - -
Gma20g01841 1169 Gene3D Phosphorylase Kinase; domain 1 882 976 - -
Gma20g01841 1169 Pfam Protein tyrosine and serine/threonine kinase 891 1152 IPR001245 GO:0004672|GO:0006468
Gma20g01841 1169 SUPERFAMILY CAD & PB1 domains 208 301 - -
Gma20g01841 1169 CDD STKc_MAP3K-like 895 1152 - -
Gma20g01841 1169 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 102 1166 - -
Gma20g01841 1169 SMART serkin_6 889 1156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma20g01841 1169 Pfam PB1 domain 208 291 IPR000270 GO:0005515
Gma20g01841 1169 PRINTS Tyrosine kinase catalytic domain signature 971 984 IPR001245 GO:0004672|GO:0006468
Gma20g01841 1169 PRINTS Tyrosine kinase catalytic domain signature 1008 1026 IPR001245 GO:0004672|GO:0006468
Gma20g01841 1169 PRINTS Tyrosine kinase catalytic domain signature 1079 1101 IPR001245 GO:0004672|GO:0006468
Gma20g01841 1169 PRINTS Tyrosine kinase catalytic domain signature 1123 1145 IPR001245 GO:0004672|GO:0006468
Gma20g01841 1169 SUPERFAMILY Protein kinase-like (PK-like) 883 1151 IPR011009 -
Gma20g01841 1169 MobiDBLite consensus disorder prediction 706 740 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01841 Gma-Chr20 45770699 45776375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01841 33 324 MAP Kinase Kinase Kinase AT1G16270 39.661 8.59e-43 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Gma20g01841 PK_Tyr_Ser-Thr 2.2e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01841 - - gmx:100807361 2370.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01867 10 45891106 45897198 Gma20g01841 20 45770699 45776375 GST