Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01839 ATGGCAGAGGTGAAGCTTCATGGATTTTGGTATAATCTCTTTACTTTGAGGGTGGTATGGACCTTAAAGTTAAAGGGTATACCATATCTAAACATAGAGAAAGACCGCTACAATAAGAGTCTTCAActtcttgaatacaacccagtatacaggaaaactccagtgcttgtccataatggaaaacccctatgtgagtccatgcttattgttgaatacattgatgagatttggccacataattcattgcttcctgctgatacctatgagagagctctggcacggttttggattaaatatgccgatgaAATTTTTCCTGCAGTTTCTGCATTCTTCAGTAGCAATAATGATGAAGAACGAGAAAAGAGTATAGAGAAGATATGGGAGCATCTAAGGGTTGTTGAGAATCAGTGTTTTGGTGATCAGAAGAAATTTTTTGGGGGAGACATTATTAACATTGTGGAGATAGATTTTGGGTCCATATTCAAATTTCTTGTTGCAGAAGATATTTTGAAGCGAAGGTCCTGGAAGATGAGAAATTCCCTCACTTGCACTCATGGTTTGCTGGAGGAGGGAAAGGATAGAGAAGAGGAAGAAGAAAGTTTTGATGGAAGAGGGTGA 618 0.2718 MAEVKLHGFWYNLFTLRVVWTLKLKGIPYLNIEKDRYNKSLQLLEYNPVYRKTPVLVHNGKPLCESMLIVEYIDEIWPHNSLLPADTYERALARFWIKYADEIFPAVSAFFSSNNDEEREKSIEKIWEHLRVVENQCFGDQKKFFGGDIINIVEIDFGSIFKFLVAEDILKRRSWKMRNSLTCTHGLLEEGKDREEEEESFDGRG 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01839 205 CDD GST_N_Tau 4 77 - -
Gma20g01839 205 SFLD Main.3: Omega- and Tau-like 1 166 IPR045073 -
Gma20g01839 205 SUPERFAMILY Thioredoxin-like 4 104 IPR036249 -
Gma20g01839 205 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Gma20g01839 205 SFLD Glutathione Transferase (cytosolic) 1 166 IPR040079 -
Gma20g01839 205 SUPERFAMILY GST C-terminal domain-like 75 168 IPR036282 -
Gma20g01839 205 Gene3D - 83 177 - -
Gma20g01839 205 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 175 IPR045073 -
Gma20g01839 205 CDD GST_C_Tau 88 166 IPR045074 GO:0004364|GO:0006749
Gma20g01839 205 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 1 175 - -
Gma20g01839 205 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
Gma20g01839 205 Gene3D Glutaredoxin 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01839 Gma-Chr20 45757570 45759051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01839 3 166 Glutathione S-transferase Gene Family AT2G29460 44.512 3.69e-41 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01839 K00799 - gmx:547584 307.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g01839 20 45757570 45759051 Gma20g01839 20 45757570 45759051 ECH