Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01838 ATGTCGTCGCGGCAAGTGGTGAAGCGTGCCAAATACAAAACCACTGTCAAAGACCCTGGCACCCCCGGCGTCCTCAAATTGACTCAAGATAAGTTCGTTTTCAAGCCGAATGATCCTACCTCGAAAACCAAGCTCGATGTGGAGTTCAGATTTATTCAGGGTCATAAAGTCACTAAAGAGGGATCAAAGAAACCAGCAtggcttaatcttatccattcacagGGAAGTTACATCTTTGAGTTAGAAACTTTTGCAGATCTTCATGTTTGCCGGGAATTGGTGGGTGTTGCCCTTAACAAGCAAGTGCCTGGAGAAGCTACAAAAGTTATTTCTGAGGAACAGCTGAGCCCTGCTGAAATGGCACTGAAGATAAAGCTATTGCAGGAAGATAGCAAGTTGCAGAGGCTTCATAAGGAACTTGTGGCTAGTGGTAAGCTTACAGAATCAGAATTTTGGGCTACAAAGAAGAAAATGCTGGATCAAGATGAAAGCAGAAAGTTAAAACAACAGATTGGTTTTAAAAATTCTTTGATCTTTGACACAAAGCCTATGAGTGATGGACGGATAAACCAGGTTAAATTTCAGTTGACGCCAGAGATAAAATATCAGATTTTTGCCCTCAAACCTGCCGTCCACCAGGCATTCCTGAATTTTGTACCTAGGAAAATGAATGAGGTAGATTTCTGGAATAAATACTTCAAAGCTGAGTATCTCCATAGCACCAAAAATGCTGTTGCAGCAGCTGCTGAGGCTGCTGAAGATGAGGATCTTGCTGTTTTTCTGAAAGATGATGAGATATTGGAAATTGAAGCTCGAAAGAAGGTTCGACGGGTTGATCCAACTTTAGACATGGAAGCAGACCAAGGAGATGATTACACACATCTTCCTGATCATGGGATTTTCCGAGACGGTAGCAAGGATATATCTGAAGCCCAAAATTCTTTGTATAAGAGAACATTGTTGCAAGATCTTAATAGACAAGGTGCAGTTGTTCTTGAAGGAAAAACTTTAGATATGGAGATGGAACACCCAAGAACAGTAGCAGAAATTCTTGCTCGGAGAAAACAGGAATGTGATGGGGTTGTAGATGAGGAGAGACAAAACAGAATTTCTAAGATGACCCTGATTGATGATCTTCAGGCACAAGATAATCATCCGTATGCACCACTCTGTATCAAGGATCCTCGTGACTATTTTGATTTCCAACAAGCTAATGCTGTAAAAACTTTGGATGATTCTCAAACTGGAATGGAGCAAATGAAATGCAGTTTGGGTTCTGAGGAAGCCTATGGCTCTTTGAGGGCATCAATATCTAAAATAAAAACTACAGGATTAAGGGATCCTCTCTTTAGTCCTGATGTTGCTCTTAAGGTCCTTAACGGATTGACTAAAAATATCTCAAGTCCCAAATATCATCTTGGGAGAAGTTCTCAAGGTAGTGTCCTTGATATATTGCCCAATACAACTAAGGAGACACTACTAGATCATTGGGTGTGCAGTCAGGAATTGCTGAGGCACTTTTGGTCTTCATATCCAATTACAACACAGAACCTTGTTAATAAGACACGAAGACTGAAAGAATCCATATCACAAATATATTCTAAACTTGAGGACATAAAGGTATCTGCTGAGTCAGACCTGCGACACCATGTTTCCCTTGTTGTCCATCCTATGCAGCAGGCTCTGAATGCTGCCTTGTTACACTATGAGGCTGACATTAGGAAAAGAAATGCAAGAGGACAGAAGCCTAACGGTTATGTTTAG 1764 0.4053 MSSRQVVKRAKYKTTVKDPGTPGVLKLTQDKFVFKPNDPTSKTKLDVEFRFIQGHKVTKEGSKKPAWLNLIHSQGSYIFELETFADLHVCRELVGVALNKQVPGEATKVISEEQLSPAEMALKIKLLQEDSKLQRLHKELVASGKLTESEFWATKKKMLDQDESRKLKQQIGFKNSLIFDTKPMSDGRINQVKFQLTPEIKYQIFALKPAVHQAFLNFVPRKMNEVDFWNKYFKAEYLHSTKNAVAAAAEAAEDEDLAVFLKDDEILEIEARKKVRRVDPTLDMEADQGDDYTHLPDHGIFRDGSKDISEAQNSLYKRTLLQDLNRQGAVVLEGKTLDMEMEHPRTVAEILARRKQECDGVVDEERQNRISKMTLIDDLQAQDNHPYAPLCIKDPRDYFDFQQANAVKTLDDSQTGMEQMKCSLGSEEAYGSLRASISKIKTTGLRDPLFSPDVALKVLNGLTKNISSPKYHLGRSSQGSVLDILPNTTKETLLDHWVCSQELLRHFWSSYPITTQNLVNKTRRLKESISQIYSKLEDIKVSAESDLRHHVSLVVHPMQQALNAALLHYEADIRKRNARGQKPNGYV 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01838 587 SUPERFAMILY PH domain-like 6 96 - -
Gma20g01838 587 SMART wurzfinal6 179 240 IPR005607 -
Gma20g01838 587 SMART wurzfinal6 109 163 IPR005607 -
Gma20g01838 587 ProSiteProfiles BSD domain profile. 105 163 IPR005607 -
Gma20g01838 587 SUPERFAMILY BSD domain-like 188 242 IPR035925 -
Gma20g01838 587 Pfam BSD domain 190 243 IPR005607 -
Gma20g01838 587 ProSiteProfiles BSD domain profile. 188 240 IPR005607 -
Gma20g01838 587 PANTHER TRANSCRIPTION INITIATION FACTOR IIH-RELATED 4 576 IPR027079 GO:0000439|GO:0006289|GO:0006351
Gma20g01838 587 SUPERFAMILY BSD domain-like 114 159 IPR035925 -
Gma20g01838 587 Gene3D - 117 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01838 Gma-Chr20 45742132 45754632 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01838 K03141 - gmx:100776016 1157.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00544 10 5596601 5599045 Gma20g01838 20 45742132 45754632 GST