Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01835 ATGGCAACAGGATCAAAGTTTTTGGACAATGCAATTATAAGAGGTTCTCATTCTCTCACTGCCTCCAACCATGTTCCTGTATTAAGAGGTGGGGTAAACTCATCAATAGCATCACCTCATGAAAAGCTTCTTTTATGTTCAAATTCTGTTTCCATGAAAGAGGAGGCACCTTTAGCCACTTGGATTAGTCATATCCCTGCAAAATTCAATGGCCATGAAGACATCAAGAATGGCAAAGAGAAAAACCAATCCAATTCTATCTTCCCAGTCTCAGACATAAAAAACAGTTCCATTCCTCTAAATCTTTTGGAAACTCTCCCACCATTAACCATAGCGCCATGTTTTGATGATCCAGTGGCTTCCCTAGCATCTTCTTCTGCCAGACCAAAATTTCCAAACTTGACTTTGTTTTTGCCGGAACCCTCCATGGTGTACTCATCAATATCATCCTCAAATATAAAAGGTGGTGAAGTCATGTCAGCTACTTCAGACCCCTCATATCATGTGTCTCAGTTTGGCCAAAACCAGCATCAAGCAGGTAGTGGGGATGCACACAAAATGAACAACAACCTAACAAATTCGCGGTCCAAGTCTTTCAACGAGAATTGGTTGAGTGCCACTAGGACTCAGCCTTTGAAGTATGGTGGAAGAGGCAAGCTGTTTAAAGGTGTGAGGCAGAGACACTGGGGGAAATGGGTAGCTGAGATTAGATTACCAAGAAACAGGACAAGGGTTTGGCTAGGGACTTTCGACTCCGCCGAAGATGCTGCCATCGCATATGACACAGCAGCATACATACTAAGAGGAGAATATGCTCAGTTGAACTTCCCAGATCTCAAGCATGTAATTCAGGCAAATTCTCTGAATGGAACCACTGCTGCACTTGTGGAGGCAAAACTACAAGCAATATCACAAGGTGGTTCTTCTCATAGGAAGCCAACTAATTCACCGCCAGGGTCAAGCAATAAGCACAATGATGAGAATGGAAAATTGAAAAGTATAAGTGGCAAAGATTCATCCATAAGGGTTGGAGCTGAGGTAACTGAGAGAAGCAAAAGCAAACACCATGAGACATCAGATGTGGAAGGTGTTCAGTTAAGTAGAATGCCCTCCTTAGACATGGACATCATTTGGGATGAACTTTTTATCTCTAATTCATGA 1161 0.4246 MATGSKFLDNAIIRGSHSLTASNHVPVLRGGVNSSIASPHEKLLLCSNSVSMKEEAPLATWISHIPAKFNGHEDIKNGKEKNQSNSIFPVSDIKNSSIPLNLLETLPPLTIAPCFDDPVASLASSSARPKFPNLTLFLPEPSMVYSSISSSNIKGGEVMSATSDPSYHVSQFGQNQHQAGSGDAHKMNNNLTNSRSKSFNENWLSATRTQPLKYGGRGKLFKGVRQRHWGKWVAEIRLPRNRTRVWLGTFDSAEDAAIAYDTAAYILRGEYAQLNFPDLKHVIQANSLNGTTAALVEAKLQAISQGGSSHRKPTNSPPGSSNKHNDENGKLKSISGKDSSIRVGAEVTERSKSKHHETSDVEGVQLSRMPSLDMDIIWDELFISNS 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01835 386 SUPERFAMILY DNA-binding domain 220 278 IPR016177 GO:0003677
Gma20g01835 386 MobiDBLite consensus disorder prediction 303 366 - -
Gma20g01835 386 MobiDBLite consensus disorder prediction 303 324 - -
Gma20g01835 386 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF062 2 385 - -
Gma20g01835 386 ProSiteProfiles AP2/ERF domain profile. 220 277 IPR001471 GO:0003700|GO:0006355
Gma20g01835 386 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 2 385 - -
Gma20g01835 386 CDD AP2 219 279 IPR001471 GO:0003700|GO:0006355
Gma20g01835 386 Gene3D AP2/ERF domain 220 278 IPR036955 GO:0003700|GO:0006355
Gma20g01835 386 MobiDBLite consensus disorder prediction 343 362 - -
Gma20g01835 386 Pfam AP2 domain 221 269 IPR001471 GO:0003700|GO:0006355
Gma20g01835 386 SMART rav1_2 220 283 IPR001471 GO:0003700|GO:0006355
Gma20g01835 386 PRINTS Ethylene responsive element binding protein signature 221 232 IPR001471 GO:0003700|GO:0006355
Gma20g01835 386 PRINTS Ethylene responsive element binding protein signature 243 259 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01835 Gma-Chr20 45714369 45715529 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01835 96 386 AP2-EREBP Transcription Factor Family AT4G13620 43.813 2.15e-67 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma20g01835 AP2 4.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01835 - - gmx:100820013 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01874 10 45950806 45952132 Gma20g01835 20 45714369 45715529 GST