Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01824 ATGAGTTCATCTAACCAGTTAAACCAGAGCAGCAGGTTCCTAGCAAATAAACCAAGGAATGAGGTTAATGTGCAGGGATACACCTTCAGAATTGATGGAAACACAACATTTGTGATGAACTATGGACGTTGGTCAGAAAAGCGTAAGAGACTTATTTCTGAGATACGGAGTGCTTTAAATGTTCATAATGATCAAGTTCTTGATGACAAACTACTGTTTCTCATAGACACAGTCATGAAGCACTATTTTGAACTCTTCGAGATGAAAACAAGTGCTGCAAATTTAGATGTCTTCAGTGTTGTTTCTGCTATTTGGTGCACAACAGCTGAACGCAATTTGTTGTGGATTGGAGGCTTTCGCCCTTCTCAATTGCTTCAGGCTATTCTGCCTCAAGTTCAGCATTCATGCTCCCAGCAACAACTTTCTGATATTTTTAGTTTTGTACAATCCTGTCAACAAGCAGAAGATGCTCTTGCACAAGGCATGGAAAAACTCCAGCAAAACCTTGACAAAGCAACAGCAGCTGGTGACAAAGCATTAAAACTGACGTGTGTCTCACAACAAATGTCATTTTTAAAGCAGGCCAATCATGTTCGCCAGCAATTCTTGTATCAATTATCTCGTCTCCTTACAATTTGTCAGTATGCTGAATTCTTACTTGCCTTCGGAGAATGCCTCTATAACTCCCAGCCTTGGAGCTCACTTTGA 708 0.404 MSSSNQLNQSSRFLANKPRNEVNVQGYTFRIDGNTTFVMNYGRWSEKRKRLISEIRSALNVHNDQVLDDKLLFLIDTVMKHYFELFEMKTSAANLDVFSVVSAIWCTTAERNLLWIGGFRPSQLLQAILPQVQHSCSQQQLSDIFSFVQSCQQAEDALAQGMEKLQQNLDKATAAGDKALKLTCVSQQMSFLKQANHVRQQFLYQLSRLLTICQYAEFLLAFGECLYNSQPWSSL 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01824 235 Coils Coil 155 182 - -
Gma20g01824 235 PANTHER FACTOR BZIP PROTEIN, PUTATIVE-RELATED 1 235 - -
Gma20g01824 235 Pfam Seed dormancy control 52 128 IPR025422 GO:0006351|GO:0043565
Gma20g01824 235 ProSiteProfiles DOG1 domain profile. 34 235 IPR025422 GO:0006351|GO:0043565
Gma20g01824 235 PANTHER TRANSCRIPTION FACTOR TGA9 1 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01824 Gma-Chr20 45602729 45605440 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01824 33 224 Calmodulin-binding Proteins AT5G10030 47.761 7.06e-56 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01824 K14431 - gmx:100527435 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01886 10 46076625 46081386 Gma20g01824 20 45602729 45605440 GST