Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01821 ATGAATAGTTCAGAGGAGACTGTGTTATTGCTTGTGAGCTTTATTGTTCTAACCCTTATAGTTACACTCACAGCTTATGTGTGCTCTAATAACATTCCACGCACTATTCCATCTGTGCCTGGTGGTGCCACACACTCCAACAACAACCACACCATAATCACTGTGGAGACACCTGAGCCACGCTTAGATCACACTAGTGTCAGAAGCTATCCTAGTCTCCAATTCTCCAAGGCCAAATTGTGTAGTAGCAATAGTAATAGTAGCTCTTCAAGTTGTTCCATATGCTTGATGGATTACAAAGAGTGTGATTCCTTGAGAGTGCTTCCTGCTTGTGCTCACTTCTTCCATGTCAAGTGTGTTGATCCTTGGTTGAGAATCAATTTGACATGCCCGGTTTGTAGGACCCCAATAGCCCTCCCAGATATATGTAAAAATTTGTAA 441 0.424 MNSSEETVLLLVSFIVLTLIVTLTAYVCSNNIPRTIPSVPGGATHSNNNHTIITVETPEPRLDHTSVRSYPSLQFSKAKLCSSNSNSSSSSCSICLMDYKECDSLRVLPACAHFFHVKCVDPWLRINLTCPVCRTPIALPDICKNL 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01821 146 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 47 139 IPR013083 -
Gma20g01821 146 SMART ring_2 92 133 IPR001841 -
Gma20g01821 146 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 8 145 - -
Gma20g01821 146 Pfam Ring finger domain 91 134 IPR001841 -
Gma20g01821 146 ProSiteProfiles Zinc finger RING-type profile. 92 134 IPR001841 -
Gma20g01821 146 PANTHER RING-H2 FINGER PROTEIN ATL67 8 145 IPR044289 GO:0016567|GO:0016740
Gma20g01821 146 SUPERFAMILY RING/U-box 91 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01821 Gma-Chr20 45586614 45587054 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01821 67 135 C3H Transcription Factor Family AT5G06490 52.113 7.39e-22 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01821 - - gmx:102663850 273.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01891 10 46103884 46104330 Gma20g01821 20 45586614 45587054 GST