Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma20g01821 | ATGAATAGTTCAGAGGAGACTGTGTTATTGCTTGTGAGCTTTATTGTTCTAACCCTTATAGTTACACTCACAGCTTATGTGTGCTCTAATAACATTCCACGCACTATTCCATCTGTGCCTGGTGGTGCCACACACTCCAACAACAACCACACCATAATCACTGTGGAGACACCTGAGCCACGCTTAGATCACACTAGTGTCAGAAGCTATCCTAGTCTCCAATTCTCCAAGGCCAAATTGTGTAGTAGCAATAGTAATAGTAGCTCTTCAAGTTGTTCCATATGCTTGATGGATTACAAAGAGTGTGATTCCTTGAGAGTGCTTCCTGCTTGTGCTCACTTCTTCCATGTCAAGTGTGTTGATCCTTGGTTGAGAATCAATTTGACATGCCCGGTTTGTAGGACCCCAATAGCCCTCCCAGATATATGTAAAAATTTGTAA | 441 | 0.424 | MNSSEETVLLLVSFIVLTLIVTLTAYVCSNNIPRTIPSVPGGATHSNNNHTIITVETPEPRLDHTSVRSYPSLQFSKAKLCSSNSNSSSSSCSICLMDYKECDSLRVLPACAHFFHVKCVDPWLRINLTCPVCRTPIALPDICKNL | 146 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma20g01821 | 146 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 47 | 139 | IPR013083 | - | |
Gma20g01821 | 146 | SMART | ring_2 | 92 | 133 | IPR001841 | - | |
Gma20g01821 | 146 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 8 | 145 | - | - | |
Gma20g01821 | 146 | Pfam | Ring finger domain | 91 | 134 | IPR001841 | - | |
Gma20g01821 | 146 | ProSiteProfiles | Zinc finger RING-type profile. | 92 | 134 | IPR001841 | - | |
Gma20g01821 | 146 | PANTHER | RING-H2 FINGER PROTEIN ATL67 | 8 | 145 | IPR044289 | GO:0016567|GO:0016740 | |
Gma20g01821 | 146 | SUPERFAMILY | RING/U-box | 91 | 140 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma20g01821 | Gma-Chr20 | 45586614 | 45587054 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma20g01821 | 67 | 135 | C3H Transcription Factor Family | AT5G06490 | 52.113 | 7.39e-22 | 85.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma20g01821 | - | - | gmx:102663850 | 273.092 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma10g01891 | 10 | 46103884 | 46104330 | Gma20g01821 | 20 | 45586614 | 45587054 | GST |