Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01810 ATGTTTTCTAGGTTGATACATCCTCATGAAGGGCAGGAAGACATGCAGGGTGGCTCCAATCACGCTCACCTCGGAGACCCTTGTCTTGTTTTAACCTCCGATCCCAAACCTCGTCTTCGTTGGACCGCTGACCTTCATGAACGCTTTGTTGATGCTGTCACTCAACTTGGGGGTGCCAGTAAAGCCACTCCAAAAGCAATCATGAGGACCATGAATGTCAAGGGTTTGACGCTCTATCATTTGAAGAGTCATCTTCAGAAGTACAGGCTAGGTAAGCAATCAGGAAAAGATTCTGATGAGGGATGCAAAGATGGAATGTCAGCTTCATATCTTCAAGAAAGCCCTGGTACTGATAACTCTTCTCCAAAGTTACCAGATGCTAACGAGGGTCATGAAGTCAAGGAGGCATTAAGAGCACAGATGGAAGTGCAAAGTAAACTACACTTACTAGTGGAGGCAGAGAAGCACTTGCAAATTCGCCAGGATGCAGAGCGAAGATACATGGGCATGCTTGAGCGAGCGTGTAAGATGTTGGCAGATCAATTTATTGGGGATGTAACTATTGACATGGACGGCCAAAAATTTCAAGGGCTGGAAAGCAAAACATCCAGAAGTTCCCTAGTTGATCACGTTGGCTTTTATCCCCAAGCGTGTACTGAGGTCGGCGGAATGCATGCTTCAGTAGTATCACCTATTCTTCAACCTCAAGGGGCTGACTGTTTCACTGAAAGTTGCCTAACATCACTTGAGAGTCTGGGAGGGTTGACACTAGAAGGATCTCCTGGCGGATCGAAGAAGAGGATGCTGAACTTGGACTCGATGGTAGCACCTTTGATCTGGAGTGAAGCCAACACCAGAACTCAAGGAATTCATTTAGCCAAAGTTAATCCTTCAGGAATGACTAGGGTCTga 912 0.4627 MFSRLIHPHEGQEDMQGGSNHAHLGDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLYHLKSHLQKYRLGKQSGKDSDEGCKDGMSASYLQESPGTDNSSPKLPDANEGHEVKEALRAQMEVQSKLHLLVEAEKHLQIRQDAERRYMGMLERACKMLADQFIGDVTIDMDGQKFQGLESKTSRSSLVDHVGFYPQACTEVGGMHASVVSPILQPQGADCFTESCLTSLESLGGLTLEGSPGGSKKRMLNLDSMVAPLIWSEANTRTQGIHLAKVNPSGMTRV 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01810 303 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 2 302 - -
Gma20g01810 303 Pfam MYB-CC type transfactor, LHEQLE motif 132 177 IPR025756 -
Gma20g01810 303 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 93 IPR017930 -
Gma20g01810 303 MobiDBLite consensus disorder prediction 1 21 - -
Gma20g01810 303 Gene3D - 35 93 - -
Gma20g01810 303 SUPERFAMILY Homeodomain-like 36 92 IPR009057 -
Gma20g01810 303 MobiDBLite consensus disorder prediction 110 124 - -
Gma20g01810 303 MobiDBLite consensus disorder prediction 91 128 - -
Gma20g01810 303 Pfam Myb-like DNA-binding domain 39 89 IPR001005 -
Gma20g01810 303 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 2 302 IPR044848 GO:0003700
Gma20g01810 303 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 36 91 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01810 Gma-Chr20 45484653 45487973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01810 17 214 G2-like Transcription Factor Family AT3G24120 50.476 3.96e-61 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma20g01810 Myb_DNA-binding 1.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01810 - - gsj:114401232 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01903 10 46194489 46197845 Gma20g01810 20 45484653 45487973 GST