Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01801 ATGACACCTGGTAGCACCTCTAGTACCTCGCCCTTTTCGGCAACAAGCTTGCCGGCAATGACCACTCCAACAACATGCTCTCCCGCTAACGTTAACTCAGAGGATTGTTTTAGGGATTTTCTGCTCAAGAGGTCTTACTTGTTTGGATTTGAACGGAATCTGGCGTCGGAGAGGATGGTGATGGAATCAGCAACGACGTCGATGTGGCGGTACCGAATAGGGAGTAGTAGTTTCTGGAGCAAGAGGCCTTCGCCATTCGGATCAATGGAGAAGTCGAGGGTGTTTTCGTTCAGGTATTATAGAGGGATGAAGTCACCGTTCTTCCTGAGGAGGGGTTTTTCCCCGTTGTCGGAGTCGAGTGTGAGGTATGGCAGCGAGGGGAGCTCGTCCCAGCGGAGCAAGTCGATAGCGAGTCCGATGTTTCTGCGCTCGTCGGGGGTGGCAGCCGCAGCGGCGTTCTCGTCGAGCCAGCTGAGGTGCGGGGATCCCAAGGCACTCATGTCGTCGGAGAGGTTTAACCGGAGGTAA 528 0.5455 MTPGSTSSTSPFSATSLPAMTTPTTCSPANVNSEDCFRDFLLKRSYLFGFERNLASERMVMESATTSMWRYRIGSSSFWSKRPSPFGSMEKSRVFSFRYYRGMKSPFFLRRGFSPLSESSVRYGSEGSSSQRSKSIASPMFLRSSGVAAAAAFSSSQLRCGDPKALMSSERFNRR 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01801 175 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 16 146 - -
Gma20g01801 175 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 16 146 IPR044675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01801 Gma-Chr20 45382792 45383319 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01801 42 175 C3H Transcription Factor Family AT3G18930 57.554 3.89e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01801 - K19041 gmx:100795347 241.121