Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01799 ATGGCACGGATGGGCCCAGGGTTCCGATTCCACCCCACCGACGAAGAGCTGGTGGTGTTCTACCTGAAGCGCAAGATGACCGGAAACCTCTCCCGCTACGACCACATCGCCGTTGTCGACGTCTACAAGCTCGAGCCCTGGGACCTTCCCCCTCTGTCGAAGCTGAAGACGAAGGACTTGGAATGGTACTTCTTCAGCGCGCTGGACCGCAAGTACGGAAACGGGTCGAGGACGAACCGCGCCACCGATAGGGGCTACTGGAAGACCACCGGAAAAGACCGCCCCGTCACCCACGGCGACCGCACCGTCGGAATGAAGAAGACGCTCGTTTACCACAGCGGCCGGGCCCCACACGGGCGCCGCACCAATTGGGTCATGCACGAGTACAAGATGCTCGACGAGGAATTGGCACGTGCCGGCACAGTGCCGGATGTGTTTGTGGTGTGTAGGATTTTCGAGAAGAGTGGTTCTGGGCCGAAGAATGGGGCAAAATATGGTGCTCCCTTAGATGAGAAGGAGTGGGATGTTGAGGATGAGCAGGAGGAGGAGGAGGAGAATGAGCAGAAGGACGTGGCTCCCTTGCTGGTTCCTCATAACGCGGTGGCTCCTCCTCCTCCCTTGTCGGTAGTTGCTGATAATGCGGAGGCTCATCCTCCTTTGACGGCAACTGTTGATAATAAATATATGGTGGCTCCTCCTCCTTCCTTTCAGGCTAATTTTGATGATGAGGTTTTCAATGCTGGGGCCTATGTTGAAACCAACGACCTTGACATGGAGCTTAATTGGAATGATATAATTGGGAGTGATACTTTTCCATCACTGAACTATCATCATGGGGAGTGTAGTAGCCATGCTGAGTATTCCAAAGTATTCATCAAGGATCAGGAGCCATCAGCAGGCACTTTTGGAATTTCTCGGCCTGAAAATGAGTGGTCTCTTGATATGACTGAGCAACATGGCGTGGATACAAATTCAGTGAACAACAGAGACAATGGTGAGCTGATCAATATTGCCAATCATCTGAATTTTAATGATGCATCAAATGATATGAATCTGGATCTGTTCTGGGATGCCAACGAGAATCTTCCGACTGATGGATCATTCTTGGAATACAATGATATTGCAATTGGGAATGGGAGTAGATCTACTGAGGCTGATCCTCCTGCGAATGACATTCTAGACGAGTATCTTACACTCCCTGATGATGATATTTACAAGTATATATCTTTTGATTCTCCTCAGATTCAAGAGAGTGAAAATTTTATTCCCAACCAAGGATCACCTTTCACTCGGCAGAATGTGGAGGGAGAAACTGCTGATAAATCTGTGGTTAGTAATCATAATTCTGAATCACAAACCAGAAATGAGGCTTCTTCAGTGCAGAATACACATGAGGCAAAGTTTGCACCAGGAAGTACAAATCCACTTGTTAAGCAGGCCTATGGTTGGTTAGCCAGCATCCCTGCTGCGCCTGCACATGCTATGGAGTTTCCTGCTAAGGAGATTGCTCTTGGGCTTCATCCTGTAGCTCAGTCTTCCCATCCAGCTCATATAACTACAGGTATGATCAGCATAACAGACATTACTTTAAGAGGCAATGCGATGGATTGGACGATGGGCAAAAATGGAGGGTTTAGCACTATAATATCCACTGGGTTTTGTCAACCGGATGTTAATTCGGATGCTTTGATACGTGTTTCTGGCAAGACTGCATTTGTGTTGTCGCATGGCTGGATTTTCCTGACTGGTTTCTCTGTTCTTATTCTTTCACTGAGTTGCAAGATCGGAAGCATCATGTATACTGGTAAATGA 1812 0.4812 MARMGPGFRFHPTDEELVVFYLKRKMTGNLSRYDHIAVVDVYKLEPWDLPPLSKLKTKDLEWYFFSALDRKYGNGSRTNRATDRGYWKTTGKDRPVTHGDRTVGMKKTLVYHSGRAPHGRRTNWVMHEYKMLDEELARAGTVPDVFVVCRIFEKSGSGPKNGAKYGAPLDEKEWDVEDEQEEEEENEQKDVAPLLVPHNAVAPPPPLSVVADNAEAHPPLTATVDNKYMVAPPPSFQANFDDEVFNAGAYVETNDLDMELNWNDIIGSDTFPSLNYHHGECSSHAEYSKVFIKDQEPSAGTFGISRPENEWSLDMTEQHGVDTNSVNNRDNGELINIANHLNFNDASNDMNLDLFWDANENLPTDGSFLEYNDIAIGNGSRSTEADPPANDILDEYLTLPDDDIYKYISFDSPQIQESENFIPNQGSPFTRQNVEGETADKSVVSNHNSESQTRNEASSVQNTHEAKFAPGSTNPLVKQAYGWLASIPAAPAHAMEFPAKEIALGLHPVAQSSHPAHITTGMISITDITLRGNAMDWTMGKNGGFSTIISTGFCQPDVNSDALIRVSGKTAFVLSHGWIFLTGFSVLILSLSCKIGSIMYTGK 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01799 603 Pfam No apical meristem (NAM) protein 6 130 IPR003441 GO:0003677|GO:0006355
Gma20g01799 603 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 181 - -
Gma20g01799 603 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 351 598 - -
Gma20g01799 603 MobiDBLite consensus disorder prediction 162 189 - -
Gma20g01799 603 MobiDBLite consensus disorder prediction 438 469 - -
Gma20g01799 603 MobiDBLite consensus disorder prediction 172 188 - -
Gma20g01799 603 PANTHER NAC DOMAIN-CONTAINING PROTEIN 53-LIKE 351 598 - -
Gma20g01799 603 PANTHER NAC DOMAIN-CONTAINING PROTEIN 53-LIKE 4 181 - -
Gma20g01799 603 MobiDBLite consensus disorder prediction 438 471 - -
Gma20g01799 603 Gene3D NAC domain 13 157 IPR036093 GO:0003677|GO:0006355
Gma20g01799 603 SUPERFAMILY NAC domain 3 154 IPR036093 GO:0003677|GO:0006355
Gma20g01799 603 ProSiteProfiles NAC domain profile. 4 154 IPR003441 GO:0003677|GO:0006355
Gma20g01799 603 Coils Coil 169 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01799 Gma-Chr20 45371341 45374877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01799 355 599 NAC Transcription Factor Family AT5G04410 30.000 2.77e-21 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma20g01799 NAM 3.3e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01799 - - gmx:100808260 1196.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g01910 10 46291221 46294690 Gma20g01799 20 45371341 45374877 GST