Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g01796 ATGTTTCCTTGGGTTGAACTAAGGCAAGGTTATGGCCTAACAGAAAGTAGTGGTGGAGCAGCATTTTTTGCCTCTGATAAAGATGGTAAAGCTCATCCAGATTCATGTGGGAAGTTGATTCCAACTTTTTGTGCAAAAGTGATACGCATTGAAATGGGGAAGCCTTTCCCTCCTCATAAAAAAGGAAAGTTATGGTTCAAAAGTCCTACAATTATGAAAGGATATCTAGGAAATTTGGAGGCCACAAGTGCAACAATTGATTCAGAAGGTTGGCTGAGGACTGGTGATCTTGGTTACATTGATGAGAATGAATTTGTTTATATAGTTGAACGAATAAAGGAGCTAATCAAGCACAATGGTTATCAGGTGGCTCCTGCAGAATTGGAATCTGTGCTGCTAAGTCATCCCCTTATAGTCGATGCAGCAGTCATACCCTGCATTATCCTCTCACATTTTCACTCTCATTTTTCATTATCTGTGTGA 483 0.3996 MFPWVELRQGYGLTESSGGAAFFASDKDGKAHPDSCGKLIPTFCAKVIRIEMGKPFPPHKKGKLWFKSPTIMKGYLGNLEATSATIDSEGWLRTGDLGYIDENEFVYIVERIKELIKHNGYQVAPAELESVLLSHPLIVDAAVIPCIILSHFHSHFSLSV 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g01796 160 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 2 145 - -
Gma20g01796 160 Gene3D Luciferase; Domain 3 33 111 - -
Gma20g01796 160 Gene3D - 2 27 - -
Gma20g01796 160 SUPERFAMILY Acetyl-CoA synthetase-like 2 145 - -
Gma20g01796 160 Pfam AMP-binding enzyme 6 117 IPR000873 -
Gma20g01796 160 Gene3D - 112 147 IPR045851 -
Gma20g01796 160 PANTHER AMP-DEPENDENT SYNTHETASE AND LIGASE FAMILY PROTEIN-RELATED 2 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g01796 Gma-Chr20 45346520 45347081 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma20g01796 2 145 Monolignol Biosynthesis Gene Families AT1G20480 54.861 9.68e-48 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g01796 K10526 - gmx:100783104 282.337